Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq6 147 5e-30 seq4 107 5e-18 seq1 96.9 8e-15 >seq6 Length=3820271 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| ||||| || |||||||| | ||||||||| | | ||| | |||||| Sbjct 3142811 AGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTACGGCCATCT 3142752 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| || ||||| || | ||||||||||| ||| ||| |||||| || Sbjct 3142751 TCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCTTTGTCT 3142692 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| ||| |||| |||||||| | ||| || ||||| ||||||||| Sbjct 3142691 TGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTC 3142632 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || || || ||||| Sbjct 3142631 TTTCCAGTGAGAGTCTTAACGAAGATTTG 3142603 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| ||||| || || || |||| ||||||||| | | || | || || Sbjct 3142583 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCC 3142524 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||| | |||||||||||| ||| || || || ||| Sbjct 3142523 TCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATCC 3142464 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 3142463 TGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTC 3142404 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || ||||| ||||| Sbjct 3142403 TTGCCGGTAAGAGTCTTGACAAAGATTTG 3142375 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || |||||||| |||| |||||| |||| | ||| | |||||| Sbjct 3143039 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCT 3142980 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| || || || || | ||||||||||| || || || || || Sbjct 3142979 TCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCT 3142920 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || |||||| || | |||||||| | ||| || ||||| ||||| ||| Sbjct 3142919 TGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTC 3142860 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || || ||||| || Sbjct 3142859 TTTCCGGTCAAGGTCTTGACGAAAATCTG 3142831 Score = 89.7 bits (98), Expect = 1e-12 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 199450 GTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTG 199509 ||||||||||| | || | || ||||| |||||||| || || ||||| | |||||| Sbjct 3142266 GTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAACGCTG 3142207 Query 199510 CTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 |||||| ||| ||| || || ||||||||||| ||| ||| |||| ||| || Sbjct 3142206 CTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATC 3142147 Query 199570 TGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | | || || || | ||||| ||||| || ||||| || || || || || || Sbjct 3142146 AGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATCTG 3142090 >seq4 Length=4274674 Score = 107 bits (118), Expect = 5e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | ||| | |||||||| |||||||||||||| |||| Sbjct 2700759 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGA 2700818 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | |||||||||||||| || || || || ||||| ||||| ||| || | Sbjct 2700819 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2700878 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | ||||| ||||| |||||||| || || || | Sbjct 2700879 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 2700938 Query 199620 AA 199621 || Sbjct 2700939 AA 2700940 >seq1 Length=7684667 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| ||||| |||||||| |||| ||||||||| | | || | || ||| Sbjct 2663231 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 2663290 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||||||||||||||| | |||||||||||| || Sbjct 2663291 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGG 2663331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921464055603