Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq6 123 3e-23 seq4 114 1e-20 seq1 107 2e-18 >seq6 Length=3820271 Score = 123 bits (136), Expect = 3e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || ||||| ||||||||||| || || || |||| ||||||||||| || ||||| Sbjct 3142562 TCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAG 3142503 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||||||||| | || | | |||||| ||| ||||| ||||| ||| Sbjct 3142502 ATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTT 3142444 Query 46523 GCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| || ||||| || | |||||||| ||||| || || || || || Sbjct 3142443 GTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGAGTCTTGAC 3142384 Query 46582 AAAGATTTGCAT 46593 |||||||||||| Sbjct 3142383 AAAGATTTGCAT 3142372 Score = 107 bits (118), Expect = 2e-18 Identities = 137/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 46409 TGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAG 46468 || || |||||||| || || ||||| |||| |||||||||||||| || || ||||| Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212 Query 46469 CGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCAC 46527 ||||||||||| | || | || |||||||||| ||||| ||||| ||| | | | Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCGAT 3142153 Query 46528 CGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGAT 46587 || || || ||||| || | |||||||| || || || || || || || ||||| Sbjct 3142152 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGAT 3142093 Query 46588 TTGCAT 46593 ||||| Sbjct 3142092 CTGCAT 3142087 Score = 105 bits (116), Expect = 8e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 |||||||| || ||||||||||| ||||| || | || || || ||||| || ||||| Sbjct 3142790 TCCTTTTGAATGTTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAA 3142731 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||||||||| | || | || || ||||| ||| || ||||| | Sbjct 3142730 ATCAATCGCTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGGATTTTGGACTTGACGTTA 3142671 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| ||||| || |||| ||||| || || || || || || ||||| Sbjct 3142670 TCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACG 3142611 Query 46583 AAGATTTGCAT 46593 ||||||||||| Sbjct 3142610 AAGATTTGCAT 3142600 Score = 96.9 bits (106), Expect = 4e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420 || ||||| || | | ||| | ||||| || | || |||||| ||||| ||||| Sbjct 3143060 TAGTTGCCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAA 3143001 Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480 || || |||||||| | || || || ||||| || || || ||||| |||||||||||| Sbjct 3143000 TCAGAAAGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCG 3142941 Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT 46540 | || | | |||||| || ||| || |||| | | | | ||||| |||| Sbjct 3142940 GGTGGGATACCCTCCTTATCTTGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGAT 3142881 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| ||||| || || || |||| || || || || || ||||| Sbjct 3142880 TCGACTTCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828 >seq4 Length=4274674 Score = 114 bits (126), Expect = 1e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| |||||||| | || || |||||||| ||||| || | Sbjct 2700759 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGA 2700818 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||||||||||| || | | |||||||||| |||||| ||||| | Sbjct 2700819 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2700878 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | |||||| || || || || | |||||||| |||||||| || || || || | Sbjct 2700879 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 2700938 Query 46584 A 46584 | Sbjct 2700939 A 2700939 >seq1 Length=7684667 Score = 107 bits (118), Expect = 2e-18 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| ||||||||||| |||||||| Sbjct 2663251 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAA 2663310 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||| ||||||||||||| || | | ||||||||| Sbjct 2663311 GATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTC 2663349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238336410680