Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2 152 5e-32
seq4 120 3e-22
seq6 102 8e-17
seq1 95.1 1e-14
>seq2
Length=6009755
Score = 152 bits (168), Expect = 5e-32
Identities = 348/516 (67%), Gaps = 12/516 (2%)
Strand=Plus/Minus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| || ||| || ||||| || || || ||||| || || || || || || |
Sbjct 3197659 CATGACACCAGCCTTCTGATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGC 3197600
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710
| || ||| | ||| || || |||||||||| | |||||||| ||| || |
Sbjct 3197599 AAGAGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 3197540
Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGT-TTCGCAAT 132769
|| | || | || | ||| || |||||||||||||| || |||| |||| | |
Sbjct 3197539 AAGAGCAACCAAGAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCG-AGT 3197481
Query 132770 TAAGTCCCAGCAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828
| | ||| |||| | |||| || || || ||||| | || ||| || ||||| ||
Sbjct 3197480 TCATTCCGAGCAAAGCGCAG-GGAAGAGCGTCGGTCAAGAATTCTTGTTCAATGGCAACG 3197422
Query 132829 GCGTCGGTGACGAT---TTCCCTAA-CGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTT 132884
||||| | ||| ||| ||| | | | | | ||| |||| | ||
Sbjct 3197421 GCGTCAACAATGATGTCTTCAATAATCTTGGGGCTAGGACGGTTGTTG----AGGTGGGA 3197366
Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944
||| | |||||| ||||||||| || | |||||||| | || || || ||||||
Sbjct 3197365 GAAGAGCAAGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGA 3197306
Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004
||| |||||||| ||||| | || ||||| || | ||| || || | ||| ||| |||
Sbjct 3197305 GAAGGTCAAGCCAGGCATCAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCC 3197246
Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC 133064
|| ||||||| ||||| ||||| ||||| || || ||||||| | || |||| ||
Sbjct 3197245 AGAGAAGAAGATACCCTCAACGGCAGCGAATGCGACAAGGCGCTGAGCAAAGGTGGACTC 3197186
Query 133065 TTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
||| | |||||||||||| ||||| ||||||||
Sbjct 3197185 CTTGTCCGAGATCCAGCGCAGAGCCCAGTCGGCCTT 3197150
>seq4
Length=4274674
Score = 120 bits (132), Expect = 3e-22
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| ||||||||| |||| |||||| || |||||| | |
Sbjct 2700939 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATC 2700880
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| ||||| || ||| ||||||| ||||| ||
Sbjct 2700879 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 2700820
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | || || || ||||| || || | ||||| ||| ||||||||||||||| |||
Sbjct 2700819 ATCTTTGCCGGAAAGCAGCTTGAAGATGGTCGCACTCTCTCCGACTACAACATCCAGAAG 2700760
Query 38433 G 38433
|
Sbjct 2700759 G 2700759
>seq6
Length=3820271
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||| || || || ||||| | || ||||| || |
Sbjct 3142600 ATGCAAATCTTCGTTAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 3142659
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || ||||||| |||||||| || ||||| | |||||
Sbjct 3142660 GACACCATCGATAACG-TCAAGTCCAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCA 3142718
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | |||| ||| || || || || || || | || || || |||||||||
Sbjct 3142719 GCAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAA 3142778
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| ||||||||| | || || || | || || ||| | |||| ||
Sbjct 3142779 CATTCAAAAGGAATCCACTCTACACCTTGTACTCCGTCTCCGAGGTGG 3142826
Score = 96.9 bits (106), Expect = 3e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || || || ||||| ||||||||| | || || ||| || |
Sbjct 3142372 ATGCAAATCTTTGTCAAGACTCTTACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTCT 3142431
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || || || | || || ||||| || || | |||||
Sbjct 3142432 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCA 3142490
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||| || || ||||| || |||| || |||||| |||||||||
Sbjct 3142491 GCAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAA 3142550
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| || ||| | || || || | || || |||
Sbjct 3142551 CATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGT 3142587
>seq1
Length=7684667
Score = 95.1 bits (104), Expect = 1e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| ||||| || ||| ||||||| ||||| | || | ||| || || ||||| ||
Sbjct 2663349 GACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAA 2663290
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| ||||||||| ||||||||||||||| ||||| | || || || ||||| ||
Sbjct 2663289 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTC 2663230
Query 38457 CG 38458
||
Sbjct 2663229 CG 2663228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172743730560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |