Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2 152 5e-32 seq4 120 3e-22 seq6 102 8e-17 seq1 95.1 1e-14 >seq2 Length=6009755 Score = 152 bits (168), Expect = 5e-32 Identities = 348/516 (67%), Gaps = 12/516 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || ||||| || || || ||||| || || || || || || | Sbjct 3197659 CATGACACCAGCCTTCTGATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGC 3197600 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 | || ||| | ||| || || |||||||||| | |||||||| ||| || | Sbjct 3197599 AAGAGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 3197540 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGT-TTCGCAAT 132769 || | || | || | ||| || |||||||||||||| || |||| |||| | | Sbjct 3197539 AAGAGCAACCAAGAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCG-AGT 3197481 Query 132770 TAAGTCCCAGCAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828 | | ||| |||| | |||| || || || ||||| | || ||| || ||||| || Sbjct 3197480 TCATTCCGAGCAAAGCGCAG-GGAAGAGCGTCGGTCAAGAATTCTTGTTCAATGGCAACG 3197422 Query 132829 GCGTCGGTGACGAT---TTCCCTAA-CGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTT 132884 ||||| | ||| ||| ||| | | | | | ||| |||| | || Sbjct 3197421 GCGTCAACAATGATGTCTTCAATAATCTTGGGGCTAGGACGGTTGTTG----AGGTGGGA 3197366 Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 ||| | |||||| ||||||||| || | |||||||| | || || || |||||| Sbjct 3197365 GAAGAGCAAGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGA 3197306 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004 ||| |||||||| ||||| | || ||||| || | ||| || || | ||| ||| ||| Sbjct 3197305 GAAGGTCAAGCCAGGCATCAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCC 3197246 Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC 133064 || ||||||| ||||| ||||| ||||| || || ||||||| | || |||| || Sbjct 3197245 AGAGAAGAAGATACCCTCAACGGCAGCGAATGCGACAAGGCGCTGAGCAAAGGTGGACTC 3197186 Query 133065 TTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 ||| | |||||||||||| ||||| |||||||| Sbjct 3197185 CTTGTCCGAGATCCAGCGCAGAGCCCAGTCGGCCTT 3197150 >seq4 Length=4274674 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| |||||| || |||||| | | Sbjct 2700939 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATC 2700880 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| ||||||| ||||| || Sbjct 2700879 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 2700820 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || || || ||||| || || | ||||| ||| ||||||||||||||| ||| Sbjct 2700819 ATCTTTGCCGGAAAGCAGCTTGAAGATGGTCGCACTCTCTCCGACTACAACATCCAGAAG 2700760 Query 38433 G 38433 | Sbjct 2700759 G 2700759 >seq6 Length=3820271 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || || ||||| | || ||||| || | Sbjct 3142600 ATGCAAATCTTCGTTAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 3142659 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || ||||||| |||||||| || ||||| | ||||| Sbjct 3142660 GACACCATCGATAACG-TCAAGTCCAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCA 3142718 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | |||| ||| || || || || || || | || || || ||||||||| Sbjct 3142719 GCAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAA 3142778 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| ||||||||| | || || || | || || ||| | |||| || Sbjct 3142779 CATTCAAAAGGAATCCACTCTACACCTTGTACTCCGTCTCCGAGGTGG 3142826 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || ||||| ||||||||| | || || ||| || | Sbjct 3142372 ATGCAAATCTTTGTCAAGACTCTTACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTCT 3142431 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || || | || || ||||| || || | ||||| Sbjct 3142432 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCA 3142490 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| || || ||||| || |||| || |||||| ||||||||| Sbjct 3142491 GCAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAA 3142550 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| || ||| | || || || | || || ||| Sbjct 3142551 CATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGT 3142587 >seq1 Length=7684667 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| ||||||| ||||| | || | ||| || || ||||| || Sbjct 2663349 GACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAA 2663290 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||||||| ||||||||||||||| ||||| | || || || ||||| || Sbjct 2663289 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTC 2663230 Query 38457 CG 38458 || Sbjct 2663229 CG 2663228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172743730560