Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq5 277 2e-69 seq1 156 5e-33 seq3 89.7 7e-13 >seq5 Length=3951088 Score = 277 bits (306), Expect = 2e-69 Identities = 510/744 (69%), Gaps = 8/744 (1%) Strand=Plus/Minus Query 7406 TTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATC 7464 || || ||||| | || ||||| |||| ||| || || ||| | ||||||||||| Sbjct 2110342 TTTTTGTGTTTCCTCTTGAACTCGTTCAC-GAAATGGTTAACGAGACGAGAATCGAAATC 2110284 Query 7465 TTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAAT 7524 |||||||||||||| || || || ||||| || ||||| || |||||||| | || || Sbjct 2110283 CTCACCACCCAAGTGAGTGTCACCGGCGGTGGCCTTGACCTCGAAGATACCCTCCTCGAT 2110224 Query 7525 GTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC 7584 | | | | || ||||| || ||||||||||| || || || ||||| ||||| || Sbjct 2110223 GGTGAGGAGAGAGACATCGAAGGTACCACCACCGAGATCGAAGATGAGGACGTTGCGCTC 2110164 Query 7585 GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAAT 7644 | || ||||| ||||||||||| || || || || || || || || || || || Sbjct 2110163 ACCCTCAGCCTTCTTGTCGAGACCGTAGGCAATGGCAGCGGCAGTAGGCTCGTTGATGAT 2110104 Query 7645 ACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704 ||| || ||||| || ||||| | ||||| || || || || || || || || Sbjct 2110103 ACGGAGGACGTTCAAACCGGCAATGAGACCAGCATCCTTGGTGGCCTGACGCTGGGAGTC 2110044 Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764 ||| |||||||| ||||| || | ||| |||| |||| | |||||| || || || Sbjct 2110043 GTTGAAGTAGGCGGGGACGGTGATGACAGCGTTGTTGACGGTACCACCGAGGTAAGACTC 2109984 Query 7765 CGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTT 7824 || | || ||| ||| | | ||||| || || || || |||| | ||||| || Sbjct 2109983 AGCAGTCTCACGCATCTTGATCAAGACCATGGAAGAGATTTCCTCAGGTGTGAACTGCTT 2109924 Query 7825 CGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTT 7884 ||||| || || ||||| || || | ||| || | || | || | ||| Sbjct 2109923 GACCTCACCCTTGAACTCAACCTCGATGACGGGCTT---GGTGGCCTTGTCGACGATCTT 2109867 Query 7885 ATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAG 7944 | | | | || ||| | ||||||| | || || ||||| | ||||| | Sbjct 2109866 GAAGGGGAAGTGCTTGGCATCAGCCTGGACCTCAGGATCGGAGAACTTGCGGCCGATCAA 2109807 Query 7945 ACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTC 8004 |||||| || || || |||||||| | ||||||||||| |||||||| || || || Sbjct 2109806 ACGCTTCGCGTCGAAGACTGTGTTGTGAGGGTTCATGGCGACCTGGTTCTTGGCAGCATC 2109747 Query 8005 CCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCC 8064 ||||| ||||| || || || || || ||| |||| ||||| ||||| || || Sbjct 2109746 ACCGATGAGACGCTC---CGAGTCGGTGAAGGCAACGAACGAGGGGGTGGTTCGGTTACC 2109690 Query 8065 TTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGT 8124 |||||||| || || ||||| | ||||| | | |||| || ||||| || || || Sbjct 2109689 CTGGTCGTTGGCGATGATTTCGATACGGTCATCACGGAAGACACCCACGCAGGAGTAGGT 2109630 Query 8125 TGTTCCTAAATCAATACCGATTGC 8148 ||||| ||||| |||||||| || Sbjct 2109629 GGTTCCCAAATCGATACCGATAGC 2109606 Score = 132 bits (146), Expect = 6e-26 Identities = 256/377 (68%), Gaps = 3/377 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| || || ||||| | || ||||| || || |||||||||||||| Sbjct 2111153 TCACCAGAAAGGATAGCAGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 2111094 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||| || | || | | | | || || || ||| Sbjct 2111093 ATGGACTTGTTGGGCTCCTT---GTTGAAGAAGTCGGTGACGAGCTTCTGGATCTTGGGG 2111037 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||||||||| |||||||| | || || || |||| ||| | Sbjct 2111036 ATACGGGTGGAACCACCGACCAAGACGATTTCGTGGACGGAGGACTTGTCGACCTTGGCA 2110977 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || ||||| || ||||| |||||| | |||| ||||| ||| Sbjct 2110976 TCACGGAGGACACGCTCGACGGGCTCCATGGTGGAACGGAAGAGGTCCTGGCACAGCTCC 2110917 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || ||||| |||||||| ||||| || ||||| |||| || ||| | | || || || Sbjct 2110916 TCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCAATACCCTCGAAGAGAGAGTCGATC 2110857 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 ||||||| || || || | ||||| | || ||||| || ||||| || || || || Sbjct 2110856 TCAATGGAGGTCTGGGCGGAGGAAGAGAGGGTACGCTTAGCACGCTCGCAAGCAGTGCGG 2110797 Query 7370 AAACGACGAAGGGCACG 7386 | ||| || || ||||| Sbjct 2110796 AGACGGCGGAGAGCACG 2110780 >seq1 Length=7684667 Score = 156 bits (172), Expect = 5e-33 Identities = 250/356 (70%), Gaps = 5/356 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || || ||||||||||| ||||| || ||||| || ||| || |||| ||| Sbjct 5082193 TCAAAGTCCTCGCCACCCAAGTGAGTATCACCAGCGGTAGCCAAGACCTCGAAGACACCG 5082134 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||| | | || ||||| || ||||||||||| || || | | || | Sbjct 5082133 TTGTCAATAGAGAGAAGAGAGACATCGAAAGTACCACCACCAAGATCGTAGACGATGA-- 5082076 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | ||||| |||| || |||||||| |||||||| || || || ||||| Sbjct 5082075 -TCTGACGCTCGTCACCAGTCTTGTCCAGACCGTAGGCGATAGCGGCGGCGGTGGGTTCG 5082017 Query 7637 TTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | || ||| ||||| ||||| |||||||||||| | || || || || || || || Sbjct 5082016 TTGACAACACGCAAGAC-GTTCAAGCCAGCAATAGTACCGGCGTCCTTGGTGGCCTGACG 5081958 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| | || || |||||||| || || || ||||| |||| ||||| |||| ||||| Sbjct 5081957 TTGAGCGTCATTGAAGTAGGCGGGAACGGTAACGACGGCGTGGGTGACAGTCTTTCCGAG 5081898 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 || ||| ||||| || ||| ||||| | ||||| | |||| ||||||| Sbjct 5081897 GTAACCTTCGGCGATTTCACGCATCTTGGTCAAGACCATAGCGGAAACTTCTTCAG 5081842 Score = 82.4 bits (90), Expect = 1e-10 Identities = 114/159 (72%), Gaps = 3/159 (2%) Strand=Plus/Minus Query 7987 TTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGA 8046 ||||||||| || ||||| ||||| | |||||| | | | ||||| || ||||| || Sbjct 5081619 TTGGTTCTTGGCGGCGTCACCGATCAAACGTTCCTCGT---CGGTAAAGGCCACGTAGGA 5081563 Query 8047 TGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGAC 8106 || || | || || ||||||||||| | | ||| || || | | || ||| || Sbjct 5081562 GGGAGTGATACGGTTTCCTTGGTCGTTGACGAGAATCTCAACCTTGCCATTCTGCATCAC 5081503 Query 8107 GCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||||| || || || || ||||| ||||| |||||||| Sbjct 5081502 ACCGACACAAGAGTATGTAGTTCCCAAATCGATACCGAT 5081464 >seq3 Length=4804168 Score = 89.7 bits (98), Expect = 7e-13 Identities = 198/291 (68%), Gaps = 12/291 (4%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||||||||| || || || ||| | ||||| || |||| || Sbjct 3462242 ATCGAAGTCCTCACCACCCAAGTGAGTGTCACCGTTGGTAGACTTGACCTCGAAGACAC- 3462184 Query 7516 TCCTTC--AATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 ||||| || | | | || | ||| || ||||||||||| || || | | || Sbjct 3462183 -CCTTCTGGATCTCAAGGACAGAGATATCGAAGGTACCACCACCAAGATCGTAGA-CAGC 3462126 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | || || ||| | | ||| || | |||||| || | ||| || || || || Sbjct 3462125 A-----ATAACGCGGTCACTCTCCTTCTCCAAACCGTAGGCAAGAGCAGCAGCAGTGGGC 3462071 Query 7634 TCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || |||| || ||| ||||| ||||| || ||||| | ||||| || || || || Sbjct 3462070 TCGTTAACAACACGCAAGAC-GTTCAAACCGGCAATCTGACCAGCATCCTTGGTGGCCTG 3462012 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743 ||||| || ||||| ||||| || || || || ||||| ||| | |||| Sbjct 3462011 ACGTTGAGAGTCGTTGAAGTAAGCAGGAACAGTGACGACACCGTTCTTGAC 3461961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132728547560