Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq6 192 1e-43 seq1 93.3 9e-14 >seq6 Length=3820271 Score = 192 bits (212), Expect = 1e-43 Identities = 168/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| |||||||| || |||||||| ||||| |||| |||||| | |||||||| Sbjct 3142808 ACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTACGGCCATCTTCA 3142749 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || |||||||| ||||| || | ||| || ||||| ||||||||||||||||||||||| Sbjct 3142748 AGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGG 3142689 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||||||||| || |||||||| || ||| ||||| | || | ||||||| Sbjct 3142688 ATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTCTTT 3142629 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | |||||| Sbjct 3142628 CCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||||||||| ||||| || || ||||| |||| || || | || || ||| Sbjct 3142580 ACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCG 3142521 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | || || ||||| ||||| || || || || || ||| Sbjct 3142520 AGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGA 3142461 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||| || ||||| |||||||| | ||||| Sbjct 3142460 ATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTCTTG 3142401 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || || || | |||||| Sbjct 3142400 CCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || |||||||| | |||||| | |||||||| || || Sbjct 3143031 GTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCTTCTAGTTG 3142972 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || || || | ||| || ||||| || || || || || || ||||| ||||| Sbjct 3142971 CTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCTTGGATTTT 3142912 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || ||||||||||| || ||| ||||| | || | |||||||| || Sbjct 3142911 GCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTCTTTCCGGT 3142852 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| || || ||||| | ||||| Sbjct 3142851 CAAGGTCTTGACGAAAATCTGCAT 3142828 Score = 127 bits (140), Expect = 5e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015 ||||| ||||| || | ||| || | || |||||||||||||| || || ||||| | Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212 Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075 || || ||||| ||||||||||| || ||||| ||||| || ||||||||| || ||| Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 3142152 Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135 || || ||| ||||| |||||||| | ||||| || || | || || ||||| | Sbjct 3142151 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 3142092 Query 195136 TGCAT 195140 ||||| Sbjct 3142091 TGCAT 3142087 >seq1 Length=7684667 Score = 93.3 bits (102), Expect = 9e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||||||| || || || ||||| |||| || || | || ||||||||||| Sbjct 2663239 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGCTG 2663298 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||| || |||||||| | || || ||||| || || || || || |||||| ||| Sbjct 2663299 CTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCTGGAA 2663354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481472062903