Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 2e-15 seq4 89.7 3e-13 >seq6 Length=3820271 Score = 96.9 bits (106), Expect = 2e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 34796 CTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAG 34855 ||||||||| ||||| |||||| | || | || || ||||| || || ||||| || | Sbjct 3142272 CTGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAA 3142213 Query 34856 TCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTAT 34915 || |||||||| | || | ||||||||||| |||||| |||||| | || Sbjct 3142212 ACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGAT 3142153 Query 34916 CGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGAT 34975 | ||| | ||| || || | ||| ||||| || || ||||| ||||| || ||||| Sbjct 3142152 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGAT 3142093 Query 34976 CTGCAT 34981 |||||| Sbjct 3142092 CTGCAT 3142087 >seq4 Length=4274674 Score = 89.7 bits (98), Expect = 3e-13 Identities = 131/183 (72%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| || || | || |||| || ||||| ||||||||||| || Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATC 2700820 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || |||||||| | || | ||||||||||| ||||| ||||| || | Sbjct 2700821 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGAC--AT--T 2700876 Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 ||||| || || ||| || |||| ||| ||||| || |||||||| ||||| || Sbjct 2700877 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 2700936 Query 34970 AAA 34972 || Sbjct 2700937 GAA 2700939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633564391752