Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 >seq1 Length=7684667 Score = 98.7 bits (108), Expect = 1e-15 Identities = 269/410 (66%), Gaps = 4/410 (1%) Strand=Plus/Plus Query 48263 TTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGG 48322 |||||| |||||| ||| | ||| ||||| || || | | ||| | ||||| || Sbjct 4026686 TTCTTCTTTGCCATGGTTCTTGCGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGG 4026745 Query 48323 TTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGC 48382 || | || || || | |||| || || || ||||||||||| || | |||||||| Sbjct 4026746 CTCGAGGTAGATAGCAAACGCACCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGC 4026805 Query 48383 AGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGA 48442 || ||||| | ||||| | ||| || |||| ||| ||||| ||||||||||||| Sbjct 4026806 GGTGTTGTTGAACACTCTGAGCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCC 4026865 Query 48443 AATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAAATACCTATACCACCTGCCATT 48500 || || ||| | | | || | |||| | ||| |||||||| || Sbjct 4026866 GATGTAGGAACCAGTGGAACGGATGCGGTGGACATTG--AGACCAATACCACCGGCAGAC 4026923 Query 48501 TTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATC 48560 || || || | ||||| || || |||||||| || || || || || || || || Sbjct 4026924 TTGGAGATCATTGCACATGTCTTGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTC 4026983 Query 48561 ATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTT 48620 || | | || || ||| || | || || || ||| |||| || || || || Sbjct 4026984 ATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTG 4027043 Query 48621 GGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAAT 48670 ||||| || || | || |||||| || | ||| || ||||| ||||| Sbjct 4027044 GGAGACGCGTGTGTGAAGTATTTCTGAGACATCAAGTTGTATGTCTCAAT 4027093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108736762760