Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 156 8e-33 seq2 98.7 2e-15 >seq1 Length=7684667 Score = 156 bits (172), Expect = 8e-33 Identities = 710/1104 (64%), Gaps = 29/1104 (3%) Strand=Plus/Plus Query 221756 ATGATCTCTGTACAGAGGTTGCTGCACTT--GATGGTCCCCAGGTGATTGTGATTAGACT 221813 || |||||||| ||||||||| | ||| ||| || || |||| || || || || Sbjct 4026354 ATAATCTCTGTGCAGAGGTTG--GAACTACGGATAGTACCGAGGTTCTTTTGGTTGCTCT 4026411 Query 221814 TGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCA 221873 | ||| ||| |||||||||||||| || || |||||||| ||||||| | | Sbjct 4026412 TCTTGTTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGA 4026471 Query 221874 GAATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTT 221931 | || || |||||| | |||| || | || || | ||| | ||| || ||| Sbjct 4026472 GGATGGCGTACCAGAGCT-TCTGAGCCTTGACGGTACGAC-GACCACGACCTTCCCTCTC 4026529 Query 221932 TTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACA 221991 | | | || || | ||||| |||||| ||| ||||| | ||| | || || ||| Sbjct 4026530 GTACTTCTCG-TACAAAGCAT--CAAACTCTTCGCCGTAGACGTCGGCAAGACC-GGAAG 4026585 Query 221992 CCTGGCG-GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGT 222050 ||| | || || | || |||||| || |||| ||| || | |||||||||| | Sbjct 4026586 CCTCGTTAGGGCAGAACAATGTCCAGTCCTGGTTGGCTTCTACACGACGCATGAAGAGAT 4026645 Query 222051 CCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTT 222110 | ||| |||||| || | || ||||| | || || || || ||| | ||| | Sbjct 4026646 CAGGGGTCCACAAGGCATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCT 4026705 Query 222111 TCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAG 222170 | | || || | |||||||||| || | |||||| ||||| || |||| || | | Sbjct 4026706 TGCGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACG 4026765 Query 222171 CGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAA 222230 | || || |||||||| || || || || || || | |||||| | | | Sbjct 4026766 CACCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGA 4026825 Query 222231 GGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC 222290 | | || || || ||||| || ||| ||||| || ||||| | ||| || | Sbjct 4026826 GCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAAC 4026885 Query 222291 TCAGGTTACTGGCAGACATG----CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAG 222346 || | | || ||||| || ||||||||||| || |||||||| || || Sbjct 4026886 ---GGATGC-GGTGGACATTGAGACCAATACCACCGGCAGACTTGGAGATCATTGCACAT 4026941 Query 222347 CTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAA 222406 |||||||||| || ||| ||||| || ||| ||||| | || || || || ||| Sbjct 4026942 GTCTTGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAA 4027001 Query 222407 GACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAG 222466 || | | ||| | | | | || ||||| |||| |||||| |||||||| ||| Sbjct 4027002 GAAGCAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAG 4027061 Query 222467 TAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATC 222526 || | |||||||| | ||| ||||| | | || | ||||||| || |||||||| Sbjct 4027062 TATTTCTGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATA 4027121 Query 222527 TGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGA--GCTGG 222584 | ||| | |||| ||||| ||||| | || || ||| | | | | Sbjct 4027122 CCAACGGCAACACGCATGATCATGTGTTGGGGACGTTCGGCA--ACCTTGCCATTGATTC 4027179 Query 222585 AGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGA-GGTCAAAGTCTCTG 222643 ||| ||||| || ||| ||||||||||| || ||||| |||| || ||||| | | Sbjct 4027180 TGAGGAGGTAGGAGCGTTCGAGAGTCTTGAAACCGAAGTA-TTGATAGTTGAAGTCACGG 4027238 Query 222644 CCGTGAACCACGGCGGCGTCCAGCTCCGACTTGTGCTTTACGCTCAACTCGAAAAAGCGC 222703 | | ||| | ||| | || || || ||||| | | ||| | | | Sbjct 4027239 TCATAAACAATGGCCGAGTTCAATTCTTCTGCATGCTTCATGACAGTCTCATACATCTGA 4027298 Query 222704 TCAGACACGAGGGGAGCGTTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCAC 222763 || || | | ||| || ||| | | |||||| |||| ||||||||| | Sbjct 4027299 TCCGAAATCATGGGTAATGCCTTATTGTTCTTGGGGTTGACGTAGTGGTACAGATCTTCA 4027358 Query 222764 ATGGCATCAGAGAAC-GTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGA 222822 || || |||| ||| | || | ||||||||||| || || || |||||||| |||| Sbjct 4027359 ATCACAGCAGAAAACTGCTTCTTG-GTCTGCTTGTGTAGGTTGGAGACGGCGATACGAGC 4027417 Query 222823 CGCCAAGATACCATAGTCAGGGTG 222846 || | || | | || || ||||| Sbjct 4027418 GGCGAGGACAGCGTAATCCGGGTG 4027441 >seq2 Length=6009755 Score = 98.7 bits (108), Expect = 2e-15 Identities = 164/234 (70%), Gaps = 5/234 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| || ||| |||||||||||||||||| ||||| Sbjct 3196754 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGATCGATCTC 3196813 Query 25537 GCCAAGGACATGGACGGCTGG---TACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 | || || || ||| |||| || ||| | | || || | | ||| || | Sbjct 3196814 TCGAAAGATTTGCACGACTGGAACAACCGTCTGAACGACGATGAACGCTACTTTATCTCG 3196873 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || |||||||| |||||||||||||| || || ||||| || ||| | Sbjct 3196874 CACGTCCTCGCCTTCTTTGCTGCCTCTGATGGTATCGTCAATGAGAACTTGGTTGAGCGT 3196933 Query 25654 TTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | ||||| ||| | | || || | | || ||||| ||||||||||| Sbjct 3196934 TTCAGTGGTGAAGTTCAGATTCCTGAAGCTCGA-TGCTTCTATGGTTTCCAGAT 3196986 Score = 89.7 bits (98), Expect = 1e-12 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || || || ||||| || ||||| ||||| ||| || || ||||| | | Sbjct 3197202 AGCGCCTTGTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTA 3197261 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996 |||||||| | ||| | || ||||| || || ||| ||||||||||| ||| Sbjct 3197262 TCTTCTGGTTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCT 3197321 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 | ||||||||||| |||| || ||||||||| |||||| Sbjct 3197322 CTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCT 3197363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844695504960