Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1 156 8e-33
seq2 98.7 2e-15
>seq1
Length=7684667
Score = 156 bits (172), Expect = 8e-33
Identities = 710/1104 (64%), Gaps = 29/1104 (3%)
Strand=Plus/Plus
Query 221756 ATGATCTCTGTACAGAGGTTGCTGCACTT--GATGGTCCCCAGGTGATTGTGATTAGACT 221813
|| |||||||| ||||||||| | ||| ||| || || |||| || || || ||
Sbjct 4026354 ATAATCTCTGTGCAGAGGTTG--GAACTACGGATAGTACCGAGGTTCTTTTGGTTGCTCT 4026411
Query 221814 TGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCA 221873
| ||| ||| |||||||||||||| || || |||||||| ||||||| | |
Sbjct 4026412 TCTTGTTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGA 4026471
Query 221874 GAATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTT 221931
| || || |||||| | |||| || | || || | ||| | ||| || |||
Sbjct 4026472 GGATGGCGTACCAGAGCT-TCTGAGCCTTGACGGTACGAC-GACCACGACCTTCCCTCTC 4026529
Query 221932 TTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACA 221991
| | | || || | ||||| |||||| ||| ||||| | ||| | || || |||
Sbjct 4026530 GTACTTCTCG-TACAAAGCAT--CAAACTCTTCGCCGTAGACGTCGGCAAGACC-GGAAG 4026585
Query 221992 CCTGGCG-GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGT 222050
||| | || || | || |||||| || |||| ||| || | |||||||||| |
Sbjct 4026586 CCTCGTTAGGGCAGAACAATGTCCAGTCCTGGTTGGCTTCTACACGACGCATGAAGAGAT 4026645
Query 222051 CCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTT 222110
| ||| |||||| || | || ||||| | || || || || ||| | ||| |
Sbjct 4026646 CAGGGGTCCACAAGGCATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCT 4026705
Query 222111 TCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAG 222170
| | || || | |||||||||| || | |||||| ||||| || |||| || | |
Sbjct 4026706 TGCGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACG 4026765
Query 222171 CGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAA 222230
| || || |||||||| || || || || || || | |||||| | | |
Sbjct 4026766 CACCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGA 4026825
Query 222231 GGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC 222290
| | || || || ||||| || ||| ||||| || ||||| | ||| || |
Sbjct 4026826 GCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAAC 4026885
Query 222291 TCAGGTTACTGGCAGACATG----CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAG 222346
|| | | || ||||| || ||||||||||| || |||||||| || ||
Sbjct 4026886 ---GGATGC-GGTGGACATTGAGACCAATACCACCGGCAGACTTGGAGATCATTGCACAT 4026941
Query 222347 CTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAA 222406
|||||||||| || ||| ||||| || ||| ||||| | || || || || |||
Sbjct 4026942 GTCTTGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAA 4027001
Query 222407 GACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAG 222466
|| | | ||| | | | | || ||||| |||| |||||| |||||||| |||
Sbjct 4027002 GAAGCAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAG 4027061
Query 222467 TAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATC 222526
|| | |||||||| | ||| ||||| | | || | ||||||| || ||||||||
Sbjct 4027062 TATTTCTGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATA 4027121
Query 222527 TGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGA--GCTGG 222584
| ||| | |||| ||||| ||||| | || || ||| | | | |
Sbjct 4027122 CCAACGGCAACACGCATGATCATGTGTTGGGGACGTTCGGCA--ACCTTGCCATTGATTC 4027179
Query 222585 AGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGA-GGTCAAAGTCTCTG 222643
||| ||||| || ||| ||||||||||| || ||||| |||| || ||||| | |
Sbjct 4027180 TGAGGAGGTAGGAGCGTTCGAGAGTCTTGAAACCGAAGTA-TTGATAGTTGAAGTCACGG 4027238
Query 222644 CCGTGAACCACGGCGGCGTCCAGCTCCGACTTGTGCTTTACGCTCAACTCGAAAAAGCGC 222703
| | ||| | ||| | || || || ||||| | | ||| | | |
Sbjct 4027239 TCATAAACAATGGCCGAGTTCAATTCTTCTGCATGCTTCATGACAGTCTCATACATCTGA 4027298
Query 222704 TCAGACACGAGGGGAGCGTTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCAC 222763
|| || | | ||| || ||| | | |||||| |||| ||||||||| |
Sbjct 4027299 TCCGAAATCATGGGTAATGCCTTATTGTTCTTGGGGTTGACGTAGTGGTACAGATCTTCA 4027358
Query 222764 ATGGCATCAGAGAAC-GTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGA 222822
|| || |||| ||| | || | ||||||||||| || || || |||||||| ||||
Sbjct 4027359 ATCACAGCAGAAAACTGCTTCTTG-GTCTGCTTGTGTAGGTTGGAGACGGCGATACGAGC 4027417
Query 222823 CGCCAAGATACCATAGTCAGGGTG 222846
|| | || | | || || |||||
Sbjct 4027418 GGCGAGGACAGCGTAATCCGGGTG 4027441
>seq2
Length=6009755
Score = 98.7 bits (108), Expect = 2e-15
Identities = 164/234 (70%), Gaps = 5/234 (2%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| || ||| |||||||||||||||||| |||||
Sbjct 3196754 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGATCGATCTC 3196813
Query 25537 GCCAAGGACATGGACGGCTGG---TACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593
| || || || ||| |||| || ||| | | || || | | ||| || |
Sbjct 3196814 TCGAAAGATTTGCACGACTGGAACAACCGTCTGAACGACGATGAACGCTACTTTATCTCG 3196873
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|||| | || |||||||| |||||||||||||| || || ||||| || ||| |
Sbjct 3196874 CACGTCCTCGCCTTCTTTGCTGCCTCTGATGGTATCGTCAATGAGAACTTGGTTGAGCGT 3196933
Query 25654 TTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|||| | ||||| ||| | | || || | | || ||||| |||||||||||
Sbjct 3196934 TTCAGTGGTGAAGTTCAGATTCCTGAAGCTCGA-TGCTTCTATGGTTTCCAGAT 3196986
Score = 89.7 bits (98), Expect = 1e-12
Identities = 117/162 (72%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936
|||| || || || || ||||| || ||||| ||||| ||| || || ||||| | |
Sbjct 3197202 AGCGCCTTGTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTA 3197261
Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996
|||||||| | ||| | || ||||| || || ||| ||||||||||| |||
Sbjct 3197262 TCTTCTGGTTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCT 3197321
Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038
| ||||||||||| |||| || ||||||||| ||||||
Sbjct 3197322 CTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCT 3197363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844695504960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |