Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 9e-30
seq2 120 4e-22
>seq1
Length=7684667
Score = 145 bits (160), Expect = 9e-30
Identities = 554/858 (65%), Gaps = 19/858 (2%)
Strand=Plus/Minus
Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278
||||| ||||||| || || | || || ||||| || |||| || | | | ||||
Sbjct 4027146 ACATGATCATGCGTGTTGCCGTTGGTATTCACGGCGAGAACATCGAGAAAGCCATTGAGA 4027087
Query 75279 CATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTTCAATGCT 75337
||||| || |||||| || | || |||| ||||| | || || | ||||| ||
Sbjct 4027086 CATACAACTTGATGTCTCA-GAAATACTTCACACACGCGTCTCCCACTTTGTTCAACGCA 4027028
Query 75338 GGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 75397
||||| || |||| ||| | | |||||||||| | | || ||||| ||| ||
Sbjct 4027027 GGTACTCCTCGACCACAGCTTGCTTCTTGCTTCCTTGTGGACATGAAGGAAGACAGCATT 4026968
Query 75398 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 75457
| |||||||||| ||||| | | ||||| ||||| |||| || || ||||||
Sbjct 4026967 GAGGGTATCTATGATACTCTCAAGACATGTGCAATGATCTCCAAGTCTGCCGGTGGTATT 4026908
Query 75458 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 75517
|| | | |||| | | ||| | || || | || || ||||||
Sbjct 4026907 GGTCTCAATGTCCACCGCATCCGTTCCACTGGTTCCTACATCGGAGGAACCAATGGTACT 4026848
Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577
||| | ||| || | || ||||| | || || ||| ||| || | || || | |||
Sbjct 4026847 TCAAACGGTCTTGTGCCTATGCTCAGAGTGTTCAACAACACCGCCAGATACGTCGACCAA 4026788
Query 75578 GCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGAT 75631
| || | |||| | || | | || ||||| | || || ||||| | |||
Sbjct 4026787 GGAGG---TAACAAGCGCCCTGGTGCGTTTGCTATCTACCTCGAGCCCTGGCACTCGGAT 4026731
Query 75632 ATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA-GAGA 75690
| | ||||||||||| | || ||||| || | ||||| | || ||| | ||
Sbjct 4026730 GTTTTTGAGTTCCTTGACCTTCGCAAGAACCATGGCAAAGAAGAAG-TCCGTGCCCGTGA 4026672
Query 75691 TCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG--AGGGTGGT 75748
||| || | || |||||| || || || |||||| || || || | | ||
Sbjct 4026671 TCTGTTCTATGCCTTGTGGACCCCTGATCTCTTCATGCGTCGTGTAGAAGCCAACCAGGA 4026612
Query 75749 CAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAG 75808
| ||| | | ||||| || || |||| | ||||| |||||| || || |||
Sbjct 4026611 C--TGGACATTGTTCTGCCCTAACGAGGCTTCCGGTCTTGCCGACGTCTACGGCGAAGAG 4026554
Query 75809 TTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCC 75868
||||| || | ||| ||||| || ||| ||| | | | || || | || |
Sbjct 4026553 TTTGATGCTTTGTACGAGAAGTACGAGAGGGAAGGTCGTGGTCGTCGTACCGT-CAAGGC 4026495
Query 75869 GCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCT 75927
| || | | ||| | || || ||| | | ||||| |||||||| | || | |||||
Sbjct 4026494 TCAGAAGCTCTGGTACGCCATCCTCGAGGCTCAGACTGAGACTGGTAACCCGTTCATGCT 4026435
Query 75928 TTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTC 75987
|||||||||||||| ||||||||||| ||||||||||| | || || ||| || ||
Sbjct 4026434 CTACAAGGATGCTTGCAACAAGAAGAGCAACCAAAAGAACCTCGGTACTATCCGTAGTTC 4026375
Query 75988 AAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTT 76047
|| || ||||| || ||| | || ||| | | |||||| ||||| ||||||||
Sbjct 4026374 CAACCTCTGCACAGAGATTATTGAATACTGTGCTCCTGATGAGGTTGCTGTCTGCAATTT 4026315
Query 76048 GGCATCAATCGCCCTTCC 76065
||| || | || |||||
Sbjct 4026314 GGCTTCCCTTGCTCTTCC 4026297
>seq2
Length=6009755
Score = 120 bits (132), Expect = 4e-22
Identities = 300/455 (66%), Gaps = 12/455 (3%)
Strand=Plus/Plus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
|||| || |||||||| | || || || || ||||||||||||||||| || || |
Sbjct 3197193 CCTTTGCTCAGCGCCTTGTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCTT 3197252
Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188
| | |||| | ||||||||||| || ||| | ||||| ||| | |||||| || |
Sbjct 3197253 TTGCCTCTATCTTCTGGTTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACG 3197312
Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248
| ||||| || || || |||||||| ||| || |||||| |||||||
Sbjct 3197313 AGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCTCCCACC 3197372
Query 65249 TGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTG 65308
| || | || | || | | ||| | | |||| | || || |||| ||||
Sbjct 3197373 TCAACAACCGTCCTAGCCCCAAGATTATTGAAGACATCATTGTTGACGCCGTTGCCATTG 3197432
Query 65309 AGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGA 65368
| ||| ||| | ||||| || || || | | |||| |||||||| || ||
Sbjct 3197433 AACAAGAATTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAACTCGAAGTTGA 3197492
Query 65369 TGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTG-GGGTGCCACCC 65427
||| | ||||||| |||| || | || |||||| | |||| || || |
Sbjct 3197493 TGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTT------GGTTGCTCTTGGCAACA 3197546
Query 65428 A-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGA 65482
| | ||||| | || || |||||||| ||||| ||||| |||| || |
Sbjct 3197547 AGAAGTACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTGCCGGCA 3197606
Query 65483 AGACCAACTTCTTTGAGAAGCGAGTTGGGGACTAT 65517
||||||||||||| |||||||| ||||| ||||||
Sbjct 3197607 AGACCAACTTCTTCGAGAAGCGTGTTGGTGACTAT 3197641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569532885920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |