Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq2 122 3e-22
seq1 118 3e-21
seq8 93.3 1e-13
>seq2
Length=6009755
Score = 122 bits (134), Expect = 3e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654
||||||||||||||| ||| | || || || || |||||||| ||||| |||||||
Sbjct 4981879 ACGCTGAATATAACCCGTTTCGGCAGTCTTGACTGCGGTATCAATAAGACCTTCACGACC 4981938
Query 302655 ACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAAC 302714
|||||||||| ||||| | |||| ||| || || | || |||| |||||||
Sbjct 4981939 GGCCATAGCATGAAAGAAGAACTCTGTTGGTGTAAGACCACGAAGGTAGGAATTCTCAAC 4981998
Query 302715 GAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTC 302774
||| || | || ||| || |||| |||| ||||||||| || || || || | || |
Sbjct 4981999 GAATCCTCTCGACTCCGGAGAATAGTCGTCCTTGGTAAAATGAGGAAGCGTGCGGTATTT 4982058
Query 302775 ATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCC 302816
|||| | || ||||||||||| || || ||| |||||
Sbjct 4982059 GAAGCCAAAGGGAATACGCTTTCCTTCGACAGACTGTTGTCC 4982100
Score = 98.7 bits (108), Expect = 3e-15
Identities = 102/132 (77%), Gaps = 4/132 (3%)
Strand=Plus/Plus
Query 301821 TTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAA 301880
||||| ||| ||||||||| | || ||||| |||||| |||||| |||||||||||
Sbjct 4981091 TTCAA-ACGAGGAACACCAAGAGTAACGTT---CTTGGAACTAACACCGGCAAAGTGGAA 4981146
Query 301881 AGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAAC 301940
|||||||| ||| | || |||| ||||| || ||| ||| || || | | ||| ||
Sbjct 4981147 AGTATTCAAAGTCATCTGTGTAGCAGGCTCTCCGATAGATTGGGCGGCTAGAACACCGAC 4981206
Query 301941 CATTTCTCCTGG 301952
||||||||||||
Sbjct 4981207 CATTTCTCCTGG 4981218
Score = 87.8 bits (96), Expect = 5e-12
Identities = 152/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496
|||| || ||| ||||| | ||||||||| | |||||| ||||||| | |
Sbjct 3197133 TTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCGCTGGATCTCGGACAAGGAGTCCA 3197192
Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556
|||||| || || || || || |||| || ||||| || || ||| ||| | |
Sbjct 3197193 CCTTTGCTCAGCGCCTTGTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCTT 3197252
Query 133557 TCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACG 133616
| |||||| || ||| | || || |||||| | | ||||| || || || ||||
Sbjct 3197253 TTGCCTCTATCTTCTGGTTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACG 3197312
Query 133617 AACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657
| ||||| || | ||||||| ||||||||||| ||||||
Sbjct 3197313 AGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCC 3197353
>seq1
Length=7684667
Score = 118 bits (130), Expect = 3e-21
Identities = 403/625 (64%), Gaps = 5/625 (1%)
Strand=Plus/Plus
Query 155909 TACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA 155968
|||||| ||| || | |||| | ||| | |||||||| || || | || ||
Sbjct 4026626 TACACGACGCATGAAGAGATCAGGGGTCCACAAGGCATAGAACAGATCACGGGCACG-GA 4026684
Query 155969 CTCCT-CATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTG 156027
|| || | | ||| || ||||| || || || | ||| || || ||| | || |
Sbjct 4026685 CTTCTTCTTTGCCATGGTTCTTGCGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGG 4026744
Query 156028 GCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAG 156084
|||| || || |||||||| |||| | |||| || || || || || || | |
Sbjct 4026745 GCTCGAGGTAGATAGCAAACGCACCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGG 4026804
Query 156085 CAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGC 156144
| || || ||||| || | |||||||| | || ||| || ||||| ||||||||||| |
Sbjct 4026805 CGGTGTTGTTGAACACTCTGAGCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTC 4026864
Query 156145 GAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATT 156204
|| | ||||||| || || | || | || || ||||||||||| | | |
Sbjct 4026865 CGATGTAGGAACCAGTGGAACGGATGCGGTGGACATTGAGACCAATACCACCGGCAGACT 4026924
Query 156205 TAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA 156264
| || || || ||| ||| | ||||| | ||||| ||||| || || | ||
Sbjct 4026925 TGGAGATCATTGCACATGTCTTGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCA 4026984
Query 156265 TTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAG 156324
| | || |||| ||| | || ||||| || || || |||||||| | || |
Sbjct 4026985 TGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGG 4027044
Query 156325 GTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAA 156384
| | || || | || || || | |||||| | | ||||||||| | ||||| |
Sbjct 4027045 GAGACGCGTGTGTGAAGTATTTCTGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGA 4027104
Query 156385 GATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAA 156444
|| |||||||||| | | || | ||| ||| || || ||||| || |||
Sbjct 4027105 TGTTCTCGCCGTGAATACCAACGGCAACACGCATGATCATGTGTTGGGGACGTTCGGCAA 4027164
Query 156445 TCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAA 156504
| |||| |||| || ||||| | |||||| ||||| || || ||||| || | |
Sbjct 4027165 CCTTGCCATTGATTCTGAGGAGGTAGGAGCGTTCGAGAGTCTTGAAACCGAAGTATTGAT 4027224
Query 156505 ACAGAAAATCACGGTTGTAATCAAT 156529
| || ||||||| ||| ||||
Sbjct 4027225 AGTTGAAGTCACGGTCATAAACAAT 4027249
>seq8
Length=2941929
Score = 93.3 bits (102), Expect = 1e-13
Identities = 160/229 (70%), Gaps = 14/229 (6%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|||||||| | |||||||||||| |||||||| || |||||||| ||||||||||| |||
Sbjct 1596245 GCACCGTGCGCAATCATACAATCGCGCTCCATCTCTCCGAAACGTAGACCACCATCACGA 1596304
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCGGCT 251600
|| | ||| || ||||||| | || | | ||||||| | |||||
Sbjct 1596305 GCACGACCTTCTACAGGCTGTCTGGTCAAGATCTGGGTAGGACCACGTGCACGAGCG--- 1596361
Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660
|| |||||| | ||||| || |||||||||||| ||| ||||| | |||||
Sbjct 1596362 -TGAATCTTATCGTCGACCATGTGTCGTAGACGCTGGTAGTATGTAGGACCCAAGAAGA- 1596419
Query 251661 GCTCGAAGGCATTTGC-TCT--CCAGTTAGAGCGTTATACATAACTTCG 251706
| || | || || ||| || || || |||| ||||| ||||||
Sbjct 1596420 --CCTGAGCCTTTAGCTTCTTACCGGTATGACCGTTGTACATCACTTCG 1596466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817430281033
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |