Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 122 3e-22 seq1 118 3e-21 seq8 93.3 1e-13 >seq2 Length=6009755 Score = 122 bits (134), Expect = 3e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654 ||||||||||||||| ||| | || || || || |||||||| ||||| ||||||| Sbjct 4981879 ACGCTGAATATAACCCGTTTCGGCAGTCTTGACTGCGGTATCAATAAGACCTTCACGACC 4981938 Query 302655 ACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAAC 302714 |||||||||| ||||| | |||| ||| || || | || |||| ||||||| Sbjct 4981939 GGCCATAGCATGAAAGAAGAACTCTGTTGGTGTAAGACCACGAAGGTAGGAATTCTCAAC 4981998 Query 302715 GAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTC 302774 ||| || | || ||| || |||| |||| ||||||||| || || || || | || | Sbjct 4981999 GAATCCTCTCGACTCCGGAGAATAGTCGTCCTTGGTAAAATGAGGAAGCGTGCGGTATTT 4982058 Query 302775 ATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCC 302816 |||| | || ||||||||||| || || ||| ||||| Sbjct 4982059 GAAGCCAAAGGGAATACGCTTTCCTTCGACAGACTGTTGTCC 4982100 Score = 98.7 bits (108), Expect = 3e-15 Identities = 102/132 (77%), Gaps = 4/132 (3%) Strand=Plus/Plus Query 301821 TTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAA 301880 ||||| ||| ||||||||| | || ||||| |||||| |||||| ||||||||||| Sbjct 4981091 TTCAA-ACGAGGAACACCAAGAGTAACGTT---CTTGGAACTAACACCGGCAAAGTGGAA 4981146 Query 301881 AGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAAC 301940 |||||||| ||| | || |||| ||||| || ||| ||| || || | | ||| || Sbjct 4981147 AGTATTCAAAGTCATCTGTGTAGCAGGCTCTCCGATAGATTGGGCGGCTAGAACACCGAC 4981206 Query 301941 CATTTCTCCTGG 301952 |||||||||||| Sbjct 4981207 CATTTCTCCTGG 4981218 Score = 87.8 bits (96), Expect = 5e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496 |||| || ||| ||||| | ||||||||| | |||||| ||||||| | | Sbjct 3197133 TTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCGCTGGATCTCGGACAAGGAGTCCA 3197192 Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556 |||||| || || || || || |||| || ||||| || || ||| ||| | | Sbjct 3197193 CCTTTGCTCAGCGCCTTGTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCTT 3197252 Query 133557 TCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACG 133616 | |||||| || ||| | || || |||||| | | ||||| || || || |||| Sbjct 3197253 TTGCCTCTATCTTCTGGTTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACG 3197312 Query 133617 AACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 | ||||| || | ||||||| ||||||||||| |||||| Sbjct 3197313 AGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCC 3197353 >seq1 Length=7684667 Score = 118 bits (130), Expect = 3e-21 Identities = 403/625 (64%), Gaps = 5/625 (1%) Strand=Plus/Plus Query 155909 TACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA 155968 |||||| ||| || | |||| | ||| | |||||||| || || | || || Sbjct 4026626 TACACGACGCATGAAGAGATCAGGGGTCCACAAGGCATAGAACAGATCACGGGCACG-GA 4026684 Query 155969 CTCCT-CATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTG 156027 || || | | ||| || ||||| || || || | ||| || || ||| | || | Sbjct 4026685 CTTCTTCTTTGCCATGGTTCTTGCGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGG 4026744 Query 156028 GCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAG 156084 |||| || || |||||||| |||| | |||| || || || || || || | | Sbjct 4026745 GCTCGAGGTAGATAGCAAACGCACCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGG 4026804 Query 156085 CAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGC 156144 | || || ||||| || | |||||||| | || ||| || ||||| ||||||||||| | Sbjct 4026805 CGGTGTTGTTGAACACTCTGAGCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTC 4026864 Query 156145 GAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATT 156204 || | ||||||| || || | || | || || ||||||||||| | | | Sbjct 4026865 CGATGTAGGAACCAGTGGAACGGATGCGGTGGACATTGAGACCAATACCACCGGCAGACT 4026924 Query 156205 TAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA 156264 | || || || ||| ||| | ||||| | ||||| ||||| || || | || Sbjct 4026925 TGGAGATCATTGCACATGTCTTGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCA 4026984 Query 156265 TTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAG 156324 | | || |||| ||| | || ||||| || || || |||||||| | || | Sbjct 4026985 TGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGG 4027044 Query 156325 GTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAA 156384 | | || || | || || || | |||||| | | ||||||||| | ||||| | Sbjct 4027045 GAGACGCGTGTGTGAAGTATTTCTGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGA 4027104 Query 156385 GATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAA 156444 || |||||||||| | | || | ||| ||| || || ||||| || ||| Sbjct 4027105 TGTTCTCGCCGTGAATACCAACGGCAACACGCATGATCATGTGTTGGGGACGTTCGGCAA 4027164 Query 156445 TCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAA 156504 | |||| |||| || ||||| | |||||| ||||| || || ||||| || | | Sbjct 4027165 CCTTGCCATTGATTCTGAGGAGGTAGGAGCGTTCGAGAGTCTTGAAACCGAAGTATTGAT 4027224 Query 156505 ACAGAAAATCACGGTTGTAATCAAT 156529 | || ||||||| ||| |||| Sbjct 4027225 AGTTGAAGTCACGGTCATAAACAAT 4027249 >seq8 Length=2941929 Score = 93.3 bits (102), Expect = 1e-13 Identities = 160/229 (70%), Gaps = 14/229 (6%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | |||||||||||| |||||||| || |||||||| ||||||||||| ||| Sbjct 1596245 GCACCGTGCGCAATCATACAATCGCGCTCCATCTCTCCGAAACGTAGACCACCATCACGA 1596304 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCGGCT 251600 || | ||| || ||||||| | || | | ||||||| | ||||| Sbjct 1596305 GCACGACCTTCTACAGGCTGTCTGGTCAAGATCTGGGTAGGACCACGTGCACGAGCG--- 1596361 Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660 || |||||| | ||||| || |||||||||||| ||| ||||| | ||||| Sbjct 1596362 -TGAATCTTATCGTCGACCATGTGTCGTAGACGCTGGTAGTATGTAGGACCCAAGAAGA- 1596419 Query 251661 GCTCGAAGGCATTTGC-TCT--CCAGTTAGAGCGTTATACATAACTTCG 251706 | || | || || ||| || || || |||| ||||| |||||| Sbjct 1596420 --CCTGAGCCTTTAGCTTCTTACCGGTATGACCGTTGTACATCACTTCG 1596466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817430281033