Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq3 136 5e-26
seq1 91.5 2e-12
seq2 86.0 8e-11
>seq3
Length=4804168
Score = 136 bits (150), Expect = 5e-26
Identities = 99/115 (86%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|||||||||||||||||||||||| | || ||||| | || |||||| | || || |||
Sbjct 2729803 GCCGCCAACTACCTCGACATCAAGGCCCTTCTCGACGTCGGCTGCAAGACCGTCGCAAAC 2729744
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||||||||||||||| ||||||||||||||||||||||| ||||| || |||
Sbjct 2729743 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACCTTCAACATTCAGAACG 2729689
>seq1
Length=7684667
Score = 91.5 bits (100), Expect = 2e-12
Identities = 180/264 (68%), Gaps = 2/264 (1%)
Strand=Plus/Plus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||| | || |||| ||| || || | |||||| ||||| || ||||| ||
Sbjct 4026789 TGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGGCACAAGACCGTTTGAA 4026848
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
|| ||||| || | | ||||| || | || || | ||| | | ||
Sbjct 4026849 GTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGGACATTGAGACCA 4026908
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCTC 1630244
|| || ||||| ||||||||||| | || || ||| ||||| || || ||||| |||||
Sbjct 4026909 ATACCACCGGCAGACTTGGAGATCATTGCACA-TGTCTTGAGAGTATCATAGATACCCTC 4026967
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| ||| ||||||||||||| || ||||| || | || || | | || ||
Sbjct 4026968 AATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCGAGGAGTACC 4027027
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGC 1630328
|||||||| | ||||| | |||
Sbjct 4027028 TGCGTTGAACAAAGTGGGAGACGC 4027051
Score = 87.8 bits (96), Expect = 2e-11
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAG 18180
|| ||||||||| |||| ||| || || ||||| | || |||| ||||||||||||
Sbjct 3598383 GTAGGCTGCATCGTCGATGGCTGCCCTCCAGGCATGGCCCTCACCGAAGCCGACATCCAG 3598442
Query 18181 CCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCC 18240
||||| || || ||||| || |||||| |||| || |||| || ||||| ||
Sbjct 3598443 CCTCAAATGACCCGACGCCGCCCCGGCCAGAGCGCTCTCACCACACCCCGCAATGAAAAG 3598502
Query 18241 GATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCC 18293
|| | ||| || ||||| || || ||| ||| ||| |||||| ||||
Sbjct 3598503 GACAGAGTCGAGATTCAGTCCGGTACTGAGTGCGGATACACTCTCGGCACGCC 3598555
>seq2
Length=6009755
Score = 86.0 bits (94), Expect = 8e-11
Identities = 137/195 (70%), Gaps = 9/195 (5%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| ||| ||| | |||||| |||| | ||| ||||| | || || ||
Sbjct 3197335 ACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCAGGCATCAAACCACGTTT 3197276
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||| | ||| ||||| | | ||| ||| ||||| ||||| ||||| ||||| || ||
Sbjct 3197275 CTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATACCCTCAACGGCAGCGAA 3197216
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACTTCATCGC 869355
||| || |||| ||||||||| || |||||||| |||||| || ||
Sbjct 3197215 TGCGACAAGGCGCTGAGCAAAGGTG--GA----CTCCTTGTCCGAGATCCAGCGCAGAGC 3197162
Query 869356 CCAGTCGGCCTTTTT 869370
|||||||||||| ||
Sbjct 3197161 CCAGTCGGCCTTCTT 3197147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107138461417853
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |