Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 136 5e-26 seq1 91.5 2e-12 seq2 86.0 8e-11 >seq3 Length=4804168 Score = 136 bits (150), Expect = 5e-26 Identities = 99/115 (86%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||||||||||||||| | || ||||| | || |||||| | || || ||| Sbjct 2729803 GCCGCCAACTACCTCGACATCAAGGCCCTTCTCGACGTCGGCTGCAAGACCGTCGCAAAC 2729744 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| ||||||||||||||||||||||| ||||| || ||| Sbjct 2729743 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACCTTCAACATTCAGAACG 2729689 >seq1 Length=7684667 Score = 91.5 bits (100), Expect = 2e-12 Identities = 180/264 (68%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||||||||| | || |||| ||| || || | |||||| ||||| || ||||| || Sbjct 4026789 TGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGGCACAAGACCGTTTGAA 4026848 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 || ||||| || | | ||||| || | || || | ||| | | || Sbjct 4026849 GTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGGACATTGAGACCA 4026908 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||| ||||||||||| | || || ||| ||||| || || ||||| ||||| Sbjct 4026909 ATACCACCGGCAGACTTGGAGATCATTGCACA-TGTCTTGAGAGTATCATAGATACCCTC 4026967 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| ||||||||||||| || ||||| || | || || | | || || Sbjct 4026968 AATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCGAGGAGTACC 4027027 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGC 1630328 |||||||| | ||||| | ||| Sbjct 4027028 TGCGTTGAACAAAGTGGGAGACGC 4027051 Score = 87.8 bits (96), Expect = 2e-11 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAG 18180 || ||||||||| |||| ||| || || ||||| | || |||| |||||||||||| Sbjct 3598383 GTAGGCTGCATCGTCGATGGCTGCCCTCCAGGCATGGCCCTCACCGAAGCCGACATCCAG 3598442 Query 18181 CCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCC 18240 ||||| || || ||||| || |||||| |||| || |||| || ||||| || Sbjct 3598443 CCTCAAATGACCCGACGCCGCCCCGGCCAGAGCGCTCTCACCACACCCCGCAATGAAAAG 3598502 Query 18241 GATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCC 18293 || | ||| || ||||| || || ||| ||| ||| |||||| |||| Sbjct 3598503 GACAGAGTCGAGATTCAGTCCGGTACTGAGTGCGGATACACTCTCGGCACGCC 3598555 >seq2 Length=6009755 Score = 86.0 bits (94), Expect = 8e-11 Identities = 137/195 (70%), Gaps = 9/195 (5%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| |||| | ||| ||||| | || || || Sbjct 3197335 ACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCAGGCATCAAACCACGTTT 3197276 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| | ||| ||||| | | ||| ||| ||||| ||||| ||||| ||||| || || Sbjct 3197275 CTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATACCCTCAACGGCAGCGAA 3197216 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACTTCATCGC 869355 ||| || |||| ||||||||| || |||||||| |||||| || || Sbjct 3197215 TGCGACAAGGCGCTGAGCAAAGGTG--GA----CTCCTTGTCCGAGATCCAGCGCAGAGC 3197162 Query 869356 CCAGTCGGCCTTTTT 869370 |||||||||||| || Sbjct 3197161 CCAGTCGGCCTTCTT 3197147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138461417853