Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq6 116 2e-21
seq4 111 1e-19
seq1 102 5e-17
>seq6
Length=3820271
Score = 116 bits (128), Expect = 2e-21
Identities = 139/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 34792 CTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAG 34851
||||||||| ||||| || ||| |||| | || || || ||||| || || |||||||
Sbjct 3142272 CTGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAA 3142213
Query 34852 TCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTAT 34911
|| |||||||| | || | ||||||||||| | || || |||||| | ||
Sbjct 3142212 ACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGAT 3142153
Query 34912 CGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGAT 34971
| ||| | ||| || |||| ||| |||||||| || ||||||||||| || |||||
Sbjct 3142152 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGAT 3142093
Query 34972 CTGCATGAT 34980
|||||||||
Sbjct 3142092 CTGCATGAT 3142084
>seq4
Length=4274674
Score = 111 bits (122), Expect = 1e-19
Identities = 137/185 (74%), Gaps = 8/185 (4%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || || |||| |||| || || ||||||||||| ||||
Sbjct 2700759 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGA 2700818
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || |||||||| | || | ||||||||||| | || || ||||| ||
Sbjct 2700819 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 2700875
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| || || |||||| || | ||| |||||||| ||||||||||||||
Sbjct 2700876 -TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 2700934
Query 34964 ACAAA 34968
|| ||
Sbjct 2700935 ACGAA 2700939
>seq1
Length=7684667
Score = 102 bits (112), Expect = 5e-17
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| ||| ||||||||| ||||| ||||| || ||| |||| | ||
Sbjct 2663231 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 2663290
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||||||||||||||||| || |||||||| | || | |||||||||||
Sbjct 2663291 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTC 2663349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692764275571
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |