Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq6 105 5e-18
>seq6
Length=3820271
Score = 105 bits (116), Expect = 5e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || |||||||| ||||||||||| || || | || || ||
Sbjct 3142815 ACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTACGGCC 3142756
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||| || ||||| | ||||||| ||||| || || ||||| || |||||
Sbjct 3142755 ATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCTTT 3142696
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|||||| | ||| ||||| | || | ||||| || ||| ||||| | || ||
Sbjct 3142695 GTCTTGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGTGAT 3142636
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| | || ||||| || || |||||
Sbjct 3142635 CGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||||| ||||||||||| || ||||| || || | | ||| ||
Sbjct 3142587 ACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCC 3142528
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| ||||| || || ||||| | ||||| | ||||| || || || |||||||| ||
Sbjct 3142527 GTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTT 3142468
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|| || ||| || | ||||| | || | |||||||| || || ||||| || |
Sbjct 3142467 ATCCTG-AATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGA 3142409
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || ||||| || | || || ||||| || |||||
Sbjct 3142408 TGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219157746269
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |