Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq6 114 1e-20
seq4 104 2e-17
>seq6
Length=3820271
Score = 114 bits (126), Expect = 1e-20
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521
||||| |||||||| || ||||| ||| | || ||| ||||||||||||||| |
Sbjct 3142568 GTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGT--ACGGCCGTCCTCGAGCTGCTTTC 3142511
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || | ||||||||||| |||||||| || ||||| || ||||| ||
Sbjct 3142510 CAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTGGACT 3142451
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||| | || |||||| || | ||||| ||| |||||||| ||||
Sbjct 3142450 TGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGAG 3142391
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || || |||||
Sbjct 3142390 TCTTGACAAAGATTTGCAT 3142372
Score = 95.1 bits (104), Expect = 1e-14
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
||| |||||||||||||| || | || | ||||||||||| ||||| ||||| |||||
Sbjct 3142242 GTCTTCGAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTT 3142183
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| ||||| ||||| | || | || || | | |||||| || | |||||
Sbjct 3142182 GTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCCACCTCAAGGGTGAT 3142123
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661
||| || || || || || || ||||| |||||||||
Sbjct 3142122 GGTCTTCCCAGTGAGGGTCTTGACGAAGATCTGCATG 3142086
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||| ||||| || |||||||| | ||| ||| | || || ||
Sbjct 3143033 AAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCA-TCTTCTAG 3142975
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || || |||| | |||||||||||||| ||||| || ||||| || |||
Sbjct 3142974 TTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCTTGGAT 3142915
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
|| ||| | | |||| ||||| | | || || || | |||| || || ||
Sbjct 3142914 TTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTCTTTCC 3142855
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||||||||||||
Sbjct 3142854 GGTCAAGGTCTTGACGAAAATCTGCAT 3142828
>seq4
Length=4274674
Score = 104 bits (114), Expect = 2e-17
Identities = 133/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
||||| || ||||| ||| | ||| ||| | || || |||||||| || || | ||
Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCA-TCTTCAAGCTGCTTTCCGGCAAAGAT 2700819
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
|| |||||||||||||| ||||| || |||||||| |||||| ||||| | ||
Sbjct 2700820 CAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTC 2700879
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| ||||||| || ||| || |||| ||||| ||| ||||| || || || || |||||
Sbjct 2700880 GATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 2700939
Query 133652 A 133652
|
Sbjct 2700940 A 2700940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420745615160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |