Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 seq1 93.3 3e-14 >seq6 Length=3820271 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||| || || ||| ||| || || ||||||||||| || Sbjct 3143054 CCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAA 3142995 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | ||| || || ||||||||||| |||||||| || | || Sbjct 3142994 AGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGG 3142935 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || || || ||||| ||| |||| ||| | |||||| ||||| || Sbjct 3142934 ATACCCTCCTTATCTTGGATTTTGCTCTTC-ACATTGTCAATGGTGTCTGACGATTCGAC 3142876 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || || || || || || ||||||||| Sbjct 3142875 TTCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATA 3142827 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| ||||| || |||||||| |||||||| || || |||| || | || Sbjct 3142574 TGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCGAGCTGC 3142515 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||| || || |||||||||||||| || | || | ||| || || || ||| || Sbjct 3142514 TTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTT- 3142456 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | || | ||| | |||||| || ||||| |||| ||||| || || || || Sbjct 3142455 GGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGT 3142396 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | || || |||||||| |||||| Sbjct 3142395 AAGAGTCTTGACAAAGATTTGCATA 3142371 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | ||| | || | ||||||||| || ||||| |||||||| ||||| Sbjct 3142827 ACCACCTCGGAGACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGA 3142768 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | ||| || || || |||||||| |||||||| || | || Sbjct 3142767 AAGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGG 3142708 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||||| || | || | |||||| ||||| || Sbjct 3142707 AATGCCTTCTTTGTCTTGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTCGAC 3142648 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | |||||||| || || || | || || || ||||| |||||| Sbjct 3142647 TTCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCATA 3142599 >seq1 Length=7684667 Score = 93.3 bits (102), Expect = 3e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || |||||| ||| || || |||||||| |||||||| ||||| |||| || Sbjct 2663234 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCG 2663293 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 | || |||||||| || |||||||||||||| || | || | ||| || ||||| Sbjct 2663294 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTC 2663349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703963945280