Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2 132 7e-25 seq1 98.7 1e-14 >seq2 Length=6009755 Score = 132 bits (146), Expect = 7e-25 Identities = 221/313 (71%), Gaps = 6/313 (2%) Strand=Plus/Plus Query 1455761 ATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGC 1455820 |||| |||| | | ||| ||| |||||||| || |||||||| |||||||| |||||||| Sbjct 3196740 ATCCTCTAC-ATCAGATCTGGCAAATGTAC-AAGAAGGCCGAAGCCTCCTTCTGGACCGC 3196797 Query 1455821 CGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGT--CG-CTGAGCGACGACGA 1455877 ||| ||| |||| ||| || | | ||||| || |||| |||||| || Sbjct 3196798 CGAAGAGATCGATCTCTCGAAAGATTTGCACGACTGGAACAACCGTCTGAACGACGATGA 3196857 Query 1455878 GCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCG 1455937 ||| | || ||| ||||||||||||||| ||| || ||| ||||| ||||| | Sbjct 3196858 ACGCTACTTTATCTCGCACGTCCTCGCCTTCTTT-GCTGCCTCTGATGGTATCGTCAATG 3196916 Query 1455938 AGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACG 1455997 ||||| ||| | || || | || || || | || || || || | || || | Sbjct 3196917 AGAACTTGGTTGAGCGTTTCAGTGGTGAAGTTCAGATTCCTGAAGCTCGATGCTTCTATG 3196976 Query 1455998 GGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCT 1456057 | ||||||||| || || ||||| ||||| || || ||||| ||||| || ||||||| Sbjct 3196977 GTTTCCAGATCATGATGGAGAACATTCACTCCGAGACATACTCTCTCCTCATTGACACCT 3197036 Query 1456058 ACGTCAAGGACCC 1456070 || |||| || || Sbjct 3197037 ACATCAACGAACC 3197049 >seq1 Length=7684667 Score = 98.7 bits (108), Expect = 1e-14 Identities = 194/287 (68%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 259895 ATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGC 259954 ||||| ||| | | ||||| ||| | ||||| | || || || || || || || Sbjct 4027075 ATGTCTCAGAAATACTTCACACACGCGTCTCCCACTTTGTTCAACGCAGGTACTCCTCGA 4027016 Query 259955 CCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTAT 260014 || ||| | | || ||||| || |||||||||||| || || ||||| |||||| Sbjct 4027015 CCACAGCTTGCTTCTTGCTTCCTTGTGGACATGAAGGAAGACAGCATTGAGGGTATCTAT 4026956 Query 260015 GACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA 260074 || || |||||| || || | ||||||||| | ||||| || || ||| | | Sbjct 4026955 GATACTCTCAAGACATGTGCAATGATCTCCAAGTCTGCCGGTGGTATTGGTCTCAATGTC 4026896 Query 260075 CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTT 260134 ||| | || || | || ||||| | | || ||||| || || ||||| ||| Sbjct 4026895 CACCGCATCCGTTCCACTGGTTCCTACATCGGAGGAACCAATGGTACTTCAAACGGTCTT 4026836 Query 260135 GTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181 ||||| ||||| | || || ||| |||| || | ||||||||||| Sbjct 4026835 GTGCCTATGCTCAGAGTGTTCAACAACACCGCCAGATACGTCGACCA 4026789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810331933458