Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq6 100 3e-16
>seq6
Length=3820271
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | || |||||| || ||||||||||| | | || || | || ||
Sbjct 3143037 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCTTC 3142978
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|| |||||||| ||||| ||||| ||||||||||| | || | | |||||| ||
Sbjct 3142977 TAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCTTG 3142918
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
||| || ||||| | | | | ||||| |||||| || |||| ||||| || ||
Sbjct 3142917 GATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTCTT 3142858
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| ||||| || || || || ||||||||
Sbjct 3142857 TCCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828
Score = 98.7 bits (108), Expect = 9e-16
Identities = 135/186 (73%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 35552 TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAAC 35611
||||||||||| || | | ||| || |||| || |||||||| || ||||| |||||
Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212
Query 35612 CGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCAC 35670
||||||||||| | ||||| || |||||||||| ||||| ||| | |||| | |
Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCGAT 3142153
Query 35671 CGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATAT 35730
|| || || |||||||| | ||||| || || || || | || || || || ||
Sbjct 3142152 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGAT 3142093
Query 35731 CTGCAT 35736
||||||
Sbjct 3142092 CTGCAT 3142087
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||||||||||||||| |||| | || || | || || || |||||||| || ||
Sbjct 3142790 TCCTTTTGAATGTTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAA 3142731
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||||||||| | ||||| || || ||||| ||| || ||| | |
Sbjct 3142730 ATCAATCGCTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGGATTTTGGACTTGACGTTA 3142671
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| ||||| || |||| |||||||| || || || | ||| || ||
Sbjct 3142670 TCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACG 3142611
Query 35726 AATATCTGCAT 35736
|| || |||||
Sbjct 3142610 AAGATTTGCAT 3142600
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || || |||||||| |||| | ||| || |||| || |||||||| || || ||
Sbjct 3142562 TCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAG 3142503
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||||||||| | ||| | | |||||| ||| ||||| ||| | |||
Sbjct 3142502 ATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTT 3142444
Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | ||||| || |||||||| | ||||| || || || || | ||| || ||
Sbjct 3142443 GTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGAGTCTTGAC 3142384
Query 35725 AAATATCTGCAT 35736
||| || |||||
Sbjct 3142383 AAAGATTTGCAT 3142372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793549285720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |