Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1 178 2e-39 seq2 102 1e-16 >seq1 Length=7684667 Score = 178 bits (196), Expect = 2e-39 Identities = 562/862 (65%), Gaps = 27/862 (3%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 ||||| || | || ||||||||||| ||||| |||||| | | ||| || | | Sbjct 4026297 GGAAGAGCAAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTATTCAATA 4026356 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || ||||| || | ||||||||| || || || | ||||||||||| ||||||||| Sbjct 4026357 ATCTCTGTGCAGAGGTTGGAACTACGGATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTG 4026416 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| |||||||||||||||||| | || | || ||||| ||||| | | ||| || Sbjct 4026417 TTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATG 4026476 Query 111410 GCCTTCCA-AACATCGGCGGCT----GGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGT 111464 || | ||| | | || | | || ||||| | | | | || || ||| ||||| Sbjct 4026477 GCGTACCAGAGCTTCTGAGCCTTGACGGTACGACGAC-----CACGACCTTCCCTCTCGT 4026531 Query 111465 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 111524 |||| ||| | || |||||||| || || |||||| ||||| | |||| || Sbjct 4026532 ACTTCTCGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGT 4026591 Query 111525 CTGGACAGAAAAGAGACCATTGACCACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGG 111582 || ||||| | | ||| | || || | || || || |||||| || || || Sbjct 4026592 TAGGGCAGAACAATGTCCA--GTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCAGG 4026649 Query 111583 AATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTC 111641 |||||| || | || ||||| | ||| || | ||||| | || ||||| | Sbjct 4026650 GGTCCACAAGGCATAGAACAGATCACGGGCACGGA-CTTCTTCTTTGCCATGGTTCTTGC 4026708 Query 111642 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------ 111695 | | ||||||||||| | | ||||| |||||| ||||| || |||| || | Sbjct 4026709 GAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCAC 4026768 Query 111696 TAGATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAA 111755 || | ||| | || |||| | || || | || ||| ||| || || | | Sbjct 4026769 CAGGGCGCTTGTTA---CCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGA 4026825 Query 111756 GCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTC 111815 |||| || | || ||| | ||| |||||| || || | || || | ||| | Sbjct 4026826 GCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAAC 4026885 Query 111816 TCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCG 111875 | |||| | | |||||||| || || |||| ||||| ||||| | Sbjct 4026886 GGATGCGGTGGACATTGAGACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCT 4026945 Query 111876 TAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGG 111935 | ||||| |||||||||| | || ||| ||||| || | | |||||||||| | Sbjct 4026946 TGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAG 4027005 Query 111936 ACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATA 111994 | ||| |||| || ||||| || ||||| | || || | ||||| |||| || Sbjct 4027006 CAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATT 4027065 Query 111995 CCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCG 112054 | || |||||| || ||||||||| | | | || |||| || ||||| || || Sbjct 4027066 TC-TGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCA 4027124 Query 112055 ATTGCGACCCGCATGAACATGT 112076 | || || ||||||| ||||| Sbjct 4027125 ACGGCAACACGCATGATCATGT 4027146 >seq2 Length=6009755 Score = 102 bits (112), Expect = 1e-16 Identities = 296/455 (65%), Gaps = 12/455 (3%) Strand=Plus/Minus Query 122370 ATAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 122429 |||||| || || |||||||| |||||||||||||| || |||| ||||| ||||| Sbjct 3197641 ATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGAGAGATGTTCTCCAT 3197582 Query 122430 AAAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCC-CAACTTGTTTGAG 122483 |||||||| || || | ||||| | | | || || |||| | Sbjct 3197581 GAAGTCAAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGCAACC------AA 3197528 Query 122484 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 122543 |||||| || | || |||| ||||||| | ||||| || |||||||| |||| | Sbjct 3197527 GAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAGTTCATTCCGAGCAA 3197468 Query 122544 GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 122603 || || || ||||| | ||| ||| ||||| |||| || || | ||| Sbjct 3197467 AGCGCAGGGAAGAGCGTCGGTCAAGAATTCTTGTTCAATGGCAACGGCGTCAACAATGAT 3197408 Query 122604 GGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAA 122663 | | | ||| | | || | || | || | ||||||| |||||| Sbjct 3197407 GTCTTCAATAATCTTGGGGCTAGGACGGTTGTTGAGGTGGGAGAAGAGCAAGCAGGCAAA 3197348 Query 122664 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCAT 122723 || ||| |||||||| || || || ||||| || || |||||| | || ||||| Sbjct 3197347 GTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCAGGCAT 3197288 Query 122724 GAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 122783 | ||| || ||||||||||| | |||| | || || || ||||||||||||||||| Sbjct 3197287 CAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATACCCTC 3197228 Query 122784 CACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 || || || || | |||||| | || |||| Sbjct 3197227 AACGGCAGCGAATGCGACAAGGCGCTGAGCAAAGG 3197193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031929346400