Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1 178 2e-39
seq2 102 1e-16
>seq1
Length=7684667
Score = 178 bits (196), Expect = 2e-39
Identities = 562/862 (65%), Gaps = 27/862 (3%)
Strand=Plus/Plus
Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289
||||| || | || ||||||||||| ||||| |||||| | | ||| || | |
Sbjct 4026297 GGAAGAGCAAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTATTCAATA 4026356
Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349
|| ||||| || | ||||||||| || || || | ||||||||||| |||||||||
Sbjct 4026357 ATCTCTGTGCAGAGGTTGGAACTACGGATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTG 4026416
Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409
||||| |||||||||||||||||| | || | || ||||| ||||| | | ||| ||
Sbjct 4026417 TTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATG 4026476
Query 111410 GCCTTCCA-AACATCGGCGGCT----GGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGT 111464
|| | ||| | | || | | || ||||| | | | | || || ||| |||||
Sbjct 4026477 GCGTACCAGAGCTTCTGAGCCTTGACGGTACGACGAC-----CACGACCTTCCCTCTCGT 4026531
Query 111465 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 111524
|||| ||| | || |||||||| || || |||||| ||||| | |||| ||
Sbjct 4026532 ACTTCTCGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGT 4026591
Query 111525 CTGGACAGAAAAGAGACCATTGACCACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGG 111582
|| ||||| | | ||| | || || | || || || |||||| || || ||
Sbjct 4026592 TAGGGCAGAACAATGTCCA--GTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCAGG 4026649
Query 111583 AATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTC 111641
|||||| || | || ||||| | ||| || | ||||| | || ||||| |
Sbjct 4026650 GGTCCACAAGGCATAGAACAGATCACGGGCACGGA-CTTCTTCTTTGCCATGGTTCTTGC 4026708
Query 111642 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------ 111695
| | ||||||||||| | | ||||| |||||| ||||| || |||| || |
Sbjct 4026709 GAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCAC 4026768
Query 111696 TAGATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAA 111755
|| | ||| | || |||| | || || | || ||| ||| || || | |
Sbjct 4026769 CAGGGCGCTTGTTA---CCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGA 4026825
Query 111756 GCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTC 111815
|||| || | || ||| | ||| |||||| || || | || || | ||| |
Sbjct 4026826 GCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAAC 4026885
Query 111816 TCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCG 111875
| |||| | | |||||||| || || |||| ||||| ||||| |
Sbjct 4026886 GGATGCGGTGGACATTGAGACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCT 4026945
Query 111876 TAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGG 111935
| ||||| |||||||||| | || ||| ||||| || | | |||||||||| |
Sbjct 4026946 TGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAG 4027005
Query 111936 ACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATA 111994
| ||| |||| || ||||| || ||||| | || || | ||||| |||| ||
Sbjct 4027006 CAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATT 4027065
Query 111995 CCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCG 112054
| || |||||| || ||||||||| | | | || |||| || ||||| || ||
Sbjct 4027066 TC-TGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCA 4027124
Query 112055 ATTGCGACCCGCATGAACATGT 112076
| || || ||||||| |||||
Sbjct 4027125 ACGGCAACACGCATGATCATGT 4027146
>seq2
Length=6009755
Score = 102 bits (112), Expect = 1e-16
Identities = 296/455 (65%), Gaps = 12/455 (3%)
Strand=Plus/Minus
Query 122370 ATAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 122429
|||||| || || |||||||| |||||||||||||| || |||| ||||| |||||
Sbjct 3197641 ATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGAGAGATGTTCTCCAT 3197582
Query 122430 AAAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCC-CAACTTGTTTGAG 122483
|||||||| || || | ||||| | | | || || |||| |
Sbjct 3197581 GAAGTCAAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGCAACC------AA 3197528
Query 122484 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 122543
|||||| || | || |||| ||||||| | ||||| || |||||||| |||| |
Sbjct 3197527 GAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAGTTCATTCCGAGCAA 3197468
Query 122544 GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 122603
|| || || ||||| | ||| ||| ||||| |||| || || | |||
Sbjct 3197467 AGCGCAGGGAAGAGCGTCGGTCAAGAATTCTTGTTCAATGGCAACGGCGTCAACAATGAT 3197408
Query 122604 GGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAA 122663
| | | ||| | | || | || | || | ||||||| ||||||
Sbjct 3197407 GTCTTCAATAATCTTGGGGCTAGGACGGTTGTTGAGGTGGGAGAAGAGCAAGCAGGCAAA 3197348
Query 122664 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCAT 122723
|| ||| |||||||| || || || ||||| || || |||||| | || |||||
Sbjct 3197347 GTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCAGGCAT 3197288
Query 122724 GAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 122783
| ||| || ||||||||||| | |||| | || || || |||||||||||||||||
Sbjct 3197287 CAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATACCCTC 3197228
Query 122784 CACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818
|| || || || | |||||| | || ||||
Sbjct 3197227 AACGGCAGCGAATGCGACAAGGCGCTGAGCAAAGG 3197193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031929346400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |