Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 141 1e-28 seq1 122 1e-22 >seq2 Length=6009755 Score = 141 bits (156), Expect = 1e-28 Identities = 305/455 (67%), Gaps = 12/455 (3%) Strand=Plus/Minus Query 129727 ATAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 129786 |||||| ||||| ||||||||||||||||| ||||| ||| | | ||| |||||||| Sbjct 3197641 ATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGAGAGATGTTCTCCAT 3197582 Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGCACTC-CAATCTGTTTGAG 129840 || ||||| ||||| | | ||| | ||| || || ||| | | Sbjct 3197581 GAAGTCAAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGCAACC------AA 3197528 Query 129841 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAG 129900 |||||| || | ||| |||| ||||||| ||||| || |||||||| |||| | Sbjct 3197527 GAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAGTTCATTCCGAGCAA 3197468 Query 129901 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGAT 129960 || || || ||||| | ||| | | |||||| | || || || | ||| Sbjct 3197467 AGCGCAGGGAAGAGCGTCGGTCAAGAATTCTTGTTCAATGGCAACGGCGTCAACAATGAT 3197408 Query 129961 GGCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAA 130020 | | | ||| ||| | || ||| | ||| | |||||| |||||| Sbjct 3197407 GTCTTCAATAATCTTGGGGCTAGGACGGTTGTTGAGGTGGGAGAAGAGCAAGCAGGCAAA 3197348 Query 130021 CTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 130080 || ||| |||||||||||||| ||||| || || || |||||| || || ||||| Sbjct 3197347 GTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCAGGCAT 3197288 Query 130081 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 130140 | ||| || |||||||||||||| || | ||| ||||||||||||||||| ||||| Sbjct 3197287 CAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATACCCTC 3197228 Query 130141 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 || ||||| || | || |||| |||||||| Sbjct 3197227 AACGGCAGCGAATGCGACAAGGCGCTGAGCAAAGG 3197193 >seq1 Length=7684667 Score = 122 bits (134), Expect = 1e-22 Identities = 993/1587 (63%), Gaps = 51/1587 (3%) Strand=Plus/Plus Query 117998 GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 118057 ||| ||||| |||||| ||||||| ||| || ||| | ||||| | ||| || || Sbjct 4025591 GATCTCCCAGACAGTCTTGTAGAGAGCCTTGATGTCAGCAGGGATGTTGGGGATGTTCTG 4025650 Query 118058 GATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTT 118117 || |||||| || | || || | | |||||| | | ||||||||||||| | Sbjct 4025651 GACGGATCCGCCGTCGGCGATGATTCGGTTCTTCATGTTGTCAGACCAGAGACCAAGGTC 4025710 Query 118118 TTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGC 118173 || |||| | || || | |||||||| || || || || | | | Sbjct 4025711 AACAAGGTCCTTGAGCAACCAGGGG----TTGACAACTTGGAATTCTCCAGCCAAGACAC 4025766 Query 118174 GTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 118232 | | ||| || || || | ||||| ||||| |||||||| ||| ||| | ||||| Sbjct 4025767 GACG-AGAGTAAATGTTCGATGTGTAAGGCTCGAAGCACTCGTTGAAACCGAGAATTTGA 4025825 Query 118233 GCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTA 118292 || ||| || ||||| || || | |||||| ||||| || | ||| | | || Sbjct 4025826 CTGGTACTGGCAGTAGGCATAGGAGCAACGAGAAGACTGTTGCGAACACCATGCTGGCTG 4025885 Query 118293 ATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCC---CCCTGCCACATA 118349 || || ||||||| | ||||||||| || || | ||| | | |||||| Sbjct 4025886 ATTTGTGCCTTGAGCGAGTCCCAGTCCCAG---AGGTCTGTGGGGGTGCGTTCCCACATG 4025942 Query 118350 TCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCA 118409 || | || | |||||| ||||| | || || ||||| | ||||| || | ||| | Sbjct 4025943 TCGTATTGCAAGATACCCTGGGAGACAGGAGAGCCCTCGTAGGTCTCGTAAGTGCCGTAC 4026002 Query 118410 ACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGA 118469 ||| || | |||| | || | ||| |||| || ||||| |||||||| | Sbjct 4026003 TCCTTGGCAAGTTCGACGGAGGCAGTCAAGGCACCGTGGTAGATTGTCTCAAAAATCTGG 4026062 Query 118470 GCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCC 118529 |||| | ||||||||| || || || | || ||| || || |||| Sbjct 4026063 ATGTTCAATTGCTTGGCCTCCGGAGAGTCGAAAGGAAGGCGGAGAGCAAGGAAAGCATCA 4026122 Query 118530 GCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTC 118589 || ||||| | ||||| | |||| || || || | | || |||| || | Sbjct 4026123 GCAAGACCATTCACACCAACTGCAATAGGACGGTGACGGAAGTTGCTCTTCTTGGC---C 4026179 Query 118590 TC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAA---CC 118643 || |||||| || | || | ||||| | | | || || || | |||| || Sbjct 4026180 TCAGGCACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGGTT---GCGCACAAGCACC 4026236 Query 118644 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA 118703 | |||| ||| || | || | | ||| | || | | || ||| | || Sbjct 4026237 TGGGTGACTTCGTGCAATTTACCAAAGTCATACTCGCCACGAGCGGTATCAACAAAGGTA 4026296 Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 ||||| || | || |||| ||| || |||| |||||| | || ||| || ||| Sbjct 4026297 GGAAGAGCAAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTATTCAATA 4026356 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || ||||| | ||| ||||| || || || | ||||||||| || ||| || Sbjct 4026357 ATCTCTGTGCAGAGGTTGGAACTACGGATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTG 4026416 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || ||||||||||| |||||| | || | || ||||| || || | || ||| || Sbjct 4026417 TTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATG 4026476 Query 118884 GCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTG-GCTCGCCCCTCTTCCTCGTACT 118941 || | ||||| | || | ||| || || || | | || || || |||||||| Sbjct 4026477 GCGTACCAGAGCTTCTG-AGCCTTGACGGT-ACGACGACCACGACCTTCCCTCTCGTACT 4026534 Query 118942 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 119001 | ||| | || ||||||||||| || | | || | || || | |||| | | Sbjct 4026535 TCTCGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTAG 4026594 Query 119002 GGCAGAAGAGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGAT 119059 ||||||| | | ||| | || | | || || || ||||||||| || ||| | Sbjct 4026595 GGCAGAACAATGTCCA--GTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCAGGGGT 4026652 Query 119060 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 119119 ||| | || |||| ||||| || || ||||||| | || || || || | Sbjct 4026653 CCACAAGGCATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCTTGCGAAG 4026712 Query 119120 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTT 119179 || | || || | | ||||| |||||| || || ||||| | || | || | Sbjct 4026713 GTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAA---ACGCACC 4026769 Query 119180 ACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCAT 119233 | | || ||| | |||| || || || || ||| ||| || || | ||||| Sbjct 4026770 AGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCAT 4026829 Query 119234 TGGAATGATACCATCGGATTGGCCATTTG-TCCCCCGA-ATACGAGACTTATTGGCTCTG 119291 || | | ||| | || ||||| | ||| |||| || || || | ||| | | Sbjct 4026830 AGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGA-AC-CAGTGGAACGG 4026887 Query 119292 ACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTG 119351 | ||||| | | ||||||||| || || |||| ||||| || || | || Sbjct 4026888 ATGCGGTGGACATTGAGACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCTTG 4026947 Query 119352 AGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGAC 119411 ||| | | ||||| || || || ||| |||| | | | |||||||| | Sbjct 4026948 AGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCA 4027007 Query 119412 ATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA-CATACC 119470 | || || | || ||||| |||||||| | ||| || | |||||| |||| || | Sbjct 4027008 AGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTC 4027067 Query 119471 TTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGAT 119530 || |||||| || ||| ||||| | | | |||| || ||||||||||| | Sbjct 4027068 -TGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAAC 4027126 Query 119531 CGAGACCCGCATAAACATGTATTGGGG 119557 | || ||||| | ||||| |||||| Sbjct 4027127 GGCAACACGCATGATCATGTGTTGGGG 4027153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435130426040