Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2 141 1e-28
seq1 122 1e-22
>seq2
Length=6009755
Score = 141 bits (156), Expect = 1e-28
Identities = 305/455 (67%), Gaps = 12/455 (3%)
Strand=Plus/Minus
Query 129727 ATAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 129786
|||||| ||||| ||||||||||||||||| ||||| ||| | | ||| ||||||||
Sbjct 3197641 ATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGAGAGATGTTCTCCAT 3197582
Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGCACTC-CAATCTGTTTGAG 129840
|| ||||| ||||| | | ||| | ||| || || ||| | |
Sbjct 3197581 GAAGTCAAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGCAACC------AA 3197528
Query 129841 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAG 129900
|||||| || | ||| |||| ||||||| ||||| || |||||||| |||| |
Sbjct 3197527 GAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAGTTCATTCCGAGCAA 3197468
Query 129901 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGAT 129960
|| || || ||||| | ||| | | |||||| | || || || | |||
Sbjct 3197467 AGCGCAGGGAAGAGCGTCGGTCAAGAATTCTTGTTCAATGGCAACGGCGTCAACAATGAT 3197408
Query 129961 GGCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAA 130020
| | | ||| ||| | || ||| | ||| | |||||| ||||||
Sbjct 3197407 GTCTTCAATAATCTTGGGGCTAGGACGGTTGTTGAGGTGGGAGAAGAGCAAGCAGGCAAA 3197348
Query 130021 CTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 130080
|| ||| |||||||||||||| ||||| || || || |||||| || || |||||
Sbjct 3197347 GTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCAGGCAT 3197288
Query 130081 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 130140
| ||| || |||||||||||||| || | ||| ||||||||||||||||| |||||
Sbjct 3197287 CAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATACCCTC 3197228
Query 130141 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175
|| ||||| || | || |||| ||||||||
Sbjct 3197227 AACGGCAGCGAATGCGACAAGGCGCTGAGCAAAGG 3197193
>seq1
Length=7684667
Score = 122 bits (134), Expect = 1e-22
Identities = 993/1587 (63%), Gaps = 51/1587 (3%)
Strand=Plus/Plus
Query 117998 GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 118057
||| ||||| |||||| ||||||| ||| || ||| | ||||| | ||| || ||
Sbjct 4025591 GATCTCCCAGACAGTCTTGTAGAGAGCCTTGATGTCAGCAGGGATGTTGGGGATGTTCTG 4025650
Query 118058 GATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTT 118117
|| |||||| || | || || | | |||||| | | ||||||||||||| |
Sbjct 4025651 GACGGATCCGCCGTCGGCGATGATTCGGTTCTTCATGTTGTCAGACCAGAGACCAAGGTC 4025710
Query 118118 TTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGC 118173
|| |||| | || || | |||||||| || || || || | | |
Sbjct 4025711 AACAAGGTCCTTGAGCAACCAGGGG----TTGACAACTTGGAATTCTCCAGCCAAGACAC 4025766
Query 118174 GTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 118232
| | ||| || || || | ||||| ||||| |||||||| ||| ||| | |||||
Sbjct 4025767 GACG-AGAGTAAATGTTCGATGTGTAAGGCTCGAAGCACTCGTTGAAACCGAGAATTTGA 4025825
Query 118233 GCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTA 118292
|| ||| || ||||| || || | |||||| ||||| || | ||| | | ||
Sbjct 4025826 CTGGTACTGGCAGTAGGCATAGGAGCAACGAGAAGACTGTTGCGAACACCATGCTGGCTG 4025885
Query 118293 ATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCC---CCCTGCCACATA 118349
|| || ||||||| | ||||||||| || || | ||| | | ||||||
Sbjct 4025886 ATTTGTGCCTTGAGCGAGTCCCAGTCCCAG---AGGTCTGTGGGGGTGCGTTCCCACATG 4025942
Query 118350 TCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCA 118409
|| | || | |||||| ||||| | || || ||||| | ||||| || | ||| |
Sbjct 4025943 TCGTATTGCAAGATACCCTGGGAGACAGGAGAGCCCTCGTAGGTCTCGTAAGTGCCGTAC 4026002
Query 118410 ACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGA 118469
||| || | |||| | || | ||| |||| || ||||| |||||||| |
Sbjct 4026003 TCCTTGGCAAGTTCGACGGAGGCAGTCAAGGCACCGTGGTAGATTGTCTCAAAAATCTGG 4026062
Query 118470 GCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCC 118529
|||| | ||||||||| || || || | || ||| || || ||||
Sbjct 4026063 ATGTTCAATTGCTTGGCCTCCGGAGAGTCGAAAGGAAGGCGGAGAGCAAGGAAAGCATCA 4026122
Query 118530 GCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTC 118589
|| ||||| | ||||| | |||| || || || | | || |||| || |
Sbjct 4026123 GCAAGACCATTCACACCAACTGCAATAGGACGGTGACGGAAGTTGCTCTTCTTGGC---C 4026179
Query 118590 TC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAA---CC 118643
|| |||||| || | || | ||||| | | | || || || | |||| ||
Sbjct 4026180 TCAGGCACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGGTT---GCGCACAAGCACC 4026236
Query 118644 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA 118703
| |||| ||| || | || | | ||| | || | | || ||| | ||
Sbjct 4026237 TGGGTGACTTCGTGCAATTTACCAAAGTCATACTCGCCACGAGCGGTATCAACAAAGGTA 4026296
Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763
||||| || | || |||| ||| || |||| |||||| | || ||| || |||
Sbjct 4026297 GGAAGAGCAAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTATTCAATA 4026356
Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823
|| || ||||| | ||| ||||| || || || | ||||||||| || ||| ||
Sbjct 4026357 ATCTCTGTGCAGAGGTTGGAACTACGGATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTG 4026416
Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883
|| || ||||||||||| |||||| | || | || ||||| || || | || ||| ||
Sbjct 4026417 TTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATG 4026476
Query 118884 GCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTG-GCTCGCCCCTCTTCCTCGTACT 118941
|| | ||||| | || | ||| || || || | | || || || ||||||||
Sbjct 4026477 GCGTACCAGAGCTTCTG-AGCCTTGACGGT-ACGACGACCACGACCTTCCCTCTCGTACT 4026534
Query 118942 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 119001
| ||| | || ||||||||||| || | | || | || || | |||| | |
Sbjct 4026535 TCTCGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTAG 4026594
Query 119002 GGCAGAAGAGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGAT 119059
||||||| | | ||| | || | | || || || ||||||||| || ||| |
Sbjct 4026595 GGCAGAACAATGTCCA--GTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCAGGGGT 4026652
Query 119060 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 119119
||| | || |||| ||||| || || ||||||| | || || || || |
Sbjct 4026653 CCACAAGGCATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCTTGCGAAG 4026712
Query 119120 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTT 119179
|| | || || | | ||||| |||||| || || ||||| | || | || |
Sbjct 4026713 GTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAA---ACGCACC 4026769
Query 119180 ACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCAT 119233
| | || ||| | |||| || || || || ||| ||| || || | |||||
Sbjct 4026770 AGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCAT 4026829
Query 119234 TGGAATGATACCATCGGATTGGCCATTTG-TCCCCCGA-ATACGAGACTTATTGGCTCTG 119291
|| | | ||| | || ||||| | ||| |||| || || || | ||| | |
Sbjct 4026830 AGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGA-AC-CAGTGGAACGG 4026887
Query 119292 ACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTG 119351
| ||||| | | ||||||||| || || |||| ||||| || || | ||
Sbjct 4026888 ATGCGGTGGACATTGAGACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCTTG 4026947
Query 119352 AGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGAC 119411
||| | | ||||| || || || ||| |||| | | | |||||||| |
Sbjct 4026948 AGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCA 4027007
Query 119412 ATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA-CATACC 119470
| || || | || ||||| |||||||| | ||| || | |||||| |||| || |
Sbjct 4027008 AGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTC 4027067
Query 119471 TTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGAT 119530
|| |||||| || ||| ||||| | | | |||| || ||||||||||| |
Sbjct 4027068 -TGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAAC 4027126
Query 119531 CGAGACCCGCATAAACATGTATTGGGG 119557
| || ||||| | ||||| ||||||
Sbjct 4027127 GGCAACACGCATGATCATGTGTTGGGG 4027153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435130426040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |