Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq5 183 9e-41 seq6 147 7e-30 seq4 86.0 2e-11 seq2 84.2 7e-11 >seq5 Length=3951088 Score = 183 bits (202), Expect = 9e-41 Identities = 481/730 (66%), Gaps = 7/730 (1%) Strand=Plus/Plus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||||| || |||||||| || || || || || || || | ||| | | |||| | Sbjct 2109604 CCGCTATCGGTATCGATTTGGGAACCACCTACTCCTGCGTGGGTGTCTTCCGTGATGACC 2109663 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 || | ||||| || || || || || |||||| |||| || || || | |||||| || | Sbjct 2109664 GTATCGAAATCATCGCCAACGACCAGGGTAACCGAACCACCCCCTCGTTCGTTGCCTTCA 2109723 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| | |||||| | || |||||| |||| || || || | || || || | | Sbjct 2109724 CCGACTCGGAGCGTCTCATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAACCCTCACA 2109783 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACA 349434 | || || || || || ||||| | || || | | || || || | | | || Sbjct 2109784 ACACAGTCTTCGACGCGAAGCGTTTGATCGGCCGCAAGTTCTCCGATCCTGAGGTCCAGG 2109843 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 ||||| || || || || || | | || | | ||| | | | || | || Sbjct 2109844 --CTGATGCCAAGCACTTCCCCTTCAAGATCGT-CGACAAGGCCACCA--AGCCCGTCAT 2109898 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 |||||||| | || ||||| || || || ||| || ||||| || || ||||| Sbjct 2109899 CGAGGTTGAGTTCAAGGGTGAGGTCAAGCAGTTCACACCTGAGGAAATCTCTTCCATGGT 2109958 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 || | || ||| || | |||||| | || | |||| || || | | ||||| Sbjct 2109959 CTTGATCAAGATGCGTGAGACTGCTGAGTCTTACCTCGGTGGTACCGTCAACAACGCTGT 2110018 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || || || || ||||| || || || |||||||| || || || |||||||| Sbjct 2110019 CATCACCGTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAGGATGCTGGTCT 2110078 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 |||||| || || || || || | || || || || || ||||| || || ||||| || Sbjct 2110079 CATTGCCGGTTTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATTGCCTA 2110138 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || || || | | ||| || || | || || || ||| | |||||||| Sbjct 2110139 CGGTCTCGACAAGAAGGCTGAGGGTGAGCGCAACGTCCTCATCTTCGATCTCGGTGGTGG 2110198 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| || ||||| || || || || | || ||||| || || || || || || || || Sbjct 2110199 TACCTTCGATGTCTCTCTCCTCACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACCGC 2110258 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 ||||| || || | ||||| || ||||| ||| |||||||||| ||||| || || Sbjct 2110259 CGGTGACACTCACTTGGGTGGTGAGGATTTCGATTCTCGTCTCGTTAACCATTTCGTGAA 2110318 Query 349915 AGAATTTAAG 349924 || || ||| Sbjct 2110319 CGAGTTCAAG 2110328 >seq6 Length=3820271 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || ||||| || ||||| || || |||||||| || || || Sbjct 3142830 CATACCACCTCGGAGACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTC 3142771 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || |||||||||||||| || ||||| || || | || ||||| ||||| Sbjct 3142770 GGAAAGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGG 3142711 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| |||||||| || || ||||| | || || ||||| || | || || | ||| Sbjct 3142710 AGGAATGCCTTCTTTGTCTTGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTC 3142651 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| | ||| | |||||||| || || || || || || || ||||| Sbjct 3142650 GACTTCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600 Score = 145 bits (160), Expect = 2e-29 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || ||||| |||||||| || ||||| || || || | Sbjct 3142606 TTTGCATACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGT 3142547 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || || || || || |||||||| ||||| | ||| ||||| | Sbjct 3142546 AGTCGGAGAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGT 3142487 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 ||||||| || || || ||||||||||| || | || || || || || | ||||| | Sbjct 3142486 CAGGAGGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGG 3142427 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || ||||| || | ||||| ||||| || || || ||||| || ||||| Sbjct 3142426 ACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372 Score = 132 bits (146), Expect = 1e-25 Identities = 157/209 (75%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| ||||| || ||||| || || || || |||||||| | || || |||||||| | Sbjct 3143034 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCTTCTA 3142976 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 |||| || |||||||| || | || ||||| || || || || || || ||||| || | Sbjct 3142975 GTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCTTGGA 3142916 Query 140650 TTTTAGCTTTT-ACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTT 140708 |||| ||| || ||||| ||||| | || || | ||| ||||| | ||| | |||||| Sbjct 3142915 TTTT-GCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTCTTT 3142857 Query 140709 CCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| | || || || ||||||||||| Sbjct 3142856 CCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828 Score = 118 bits (130), Expect = 3e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 140553 TGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGA 140612 ||||| || || ||||| | || || || ||||| || || || ||||||||||| | | Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212 Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 || ||||| ||||||||||| || || || |||||||| || | || || || || || Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 3142152 Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732 | |||||| | || || ||||| || | ||||| || || || || || || || ||| Sbjct 3142151 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 3142092 Query 140733 TGCAT 140737 ||||| Sbjct 3142091 TGCAT 3142087 >seq4 Length=4274674 Score = 86.0 bits (94), Expect = 2e-11 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || || || || || || || | || || ||||||||||| || ||||| |||||||| Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATC 2700820 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 ||||| ||||| || || || || || || || ||||| || || | || ||||| || Sbjct 2700821 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2700880 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 || | || || | || || || || || | ||||| || || || || || || ||| Sbjct 2700881 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAA 2700940 >seq2 Length=6009755 Score = 84.2 bits (92), Expect = 7e-11 Identities = 95/127 (75%), Gaps = 3/127 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || |||||| | ||||| ||| || || |||||| ||||||||||||||||| Sbjct 4981097 CGAGGAACACCAAGAGTAACGTTC---TTGGAACTAACACCGGCAAAGTGGAAAGTATTC 4981153 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 | ||| | || |||| ||||| || || || || || || | ||| || ||||||||| Sbjct 4981154 AAAGTCATCTGTGTAGCAGGCTCTCCGATAGATTGGGCGGCTAGAACACCGACCATTTCT 4981213 Query 377578 CCAGGAT 377584 || |||| Sbjct 4981214 CCTGGAT 4981220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254225272227