Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq5 183 9e-41
seq6 147 7e-30
seq4 86.0 2e-11
seq2 84.2 7e-11
>seq5
Length=3951088
Score = 183 bits (202), Expect = 9e-41
Identities = 481/730 (66%), Gaps = 7/730 (1%)
Strand=Plus/Plus
Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256
||||||| || |||||||| || || || || || || || | ||| | | |||| |
Sbjct 2109604 CCGCTATCGGTATCGATTTGGGAACCACCTACTCCTGCGTGGGTGTCTTCCGTGATGACC 2109663
Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316
|| | ||||| || || || || || |||||| |||| || || || | |||||| || |
Sbjct 2109664 GTATCGAAATCATCGCCAACGACCAGGGTAACCGAACCACCCCCTCGTTCGTTGCCTTCA 2109723
Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376
|||| | |||||| | || |||||| |||| || || || | || || || | |
Sbjct 2109724 CCGACTCGGAGCGTCTCATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAACCCTCACA 2109783
Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACA 349434
| || || || || || ||||| | || || | | || || || | | | ||
Sbjct 2109784 ACACAGTCTTCGACGCGAAGCGTTTGATCGGCCGCAAGTTCTCCGATCCTGAGGTCCAGG 2109843
Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494
||||| || || || || || | | || | | ||| | | | || | ||
Sbjct 2109844 --CTGATGCCAAGCACTTCCCCTTCAAGATCGT-CGACAAGGCCACCA--AGCCCGTCAT 2109898
Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554
|||||||| | || ||||| || || || ||| || ||||| || || |||||
Sbjct 2109899 CGAGGTTGAGTTCAAGGGTGAGGTCAAGCAGTTCACACCTGAGGAAATCTCTTCCATGGT 2109958
Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614
|| | || ||| || | |||||| | || | |||| || || | | |||||
Sbjct 2109959 CTTGATCAAGATGCGTGAGACTGCTGAGTCTTACCTCGGTGGTACCGTCAACAACGCTGT 2110018
Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674
|| || || || ||||| || || || |||||||| || || || ||||||||
Sbjct 2110019 CATCACCGTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAGGATGCTGGTCT 2110078
Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734
|||||| || || || || || | || || || || || ||||| || || ||||| ||
Sbjct 2110079 CATTGCCGGTTTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATTGCCTA 2110138
Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794
|| || || || | | ||| || || | || || || ||| | ||||||||
Sbjct 2110139 CGGTCTCGACAAGAAGGCTGAGGGTGAGCGCAACGTCCTCATCTTCGATCTCGGTGGTGG 2110198
Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854
||| || ||||| || || || || | || ||||| || || || || || || || ||
Sbjct 2110199 TACCTTCGATGTCTCTCTCCTCACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACCGC 2110258
Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914
||||| || || | ||||| || ||||| ||| |||||||||| ||||| || ||
Sbjct 2110259 CGGTGACACTCACTTGGGTGGTGAGGATTTCGATTCTCGTCTCGTTAACCATTTCGTGAA 2110318
Query 349915 AGAATTTAAG 349924
|| || |||
Sbjct 2110319 CGAGTTCAAG 2110328
>seq6
Length=3820271
Score = 147 bits (162), Expect = 7e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | | || ||||| || ||||| || || |||||||| || || ||
Sbjct 3142830 CATACCACCTCGGAGACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTC 3142771
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || |||||||||||||| || ||||| || || | || ||||| |||||
Sbjct 3142770 GGAAAGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGG 3142711
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| |||||||| || || ||||| | || || ||||| || | || || | |||
Sbjct 3142710 AGGAATGCCTTCTTTGTCTTGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTC 3142651
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| | ||| | |||||||| || || || || || || || |||||
Sbjct 3142650 GACTTCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600
Score = 145 bits (160), Expect = 2e-29
Identities = 173/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || ||||| |||||||| || ||||| || || || |
Sbjct 3142606 TTTGCATACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGT 3142547
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || || || || || || |||||||| ||||| | ||| ||||| |
Sbjct 3142546 AGTCGGAGAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGT 3142487
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
||||||| || || || ||||||||||| || | || || || || || | ||||| |
Sbjct 3142486 CAGGAGGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGG 3142427
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || ||||| || | ||||| ||||| || || || ||||| || |||||
Sbjct 3142426 ACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372
Score = 132 bits (146), Expect = 1e-25
Identities = 157/209 (75%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589
|||| ||||| || ||||| || || || || |||||||| | || || |||||||| |
Sbjct 3143034 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCTTCTA 3142976
Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649
|||| || |||||||| || | || ||||| || || || || || || ||||| || |
Sbjct 3142975 GTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCTTGGA 3142916
Query 140650 TTTTAGCTTTT-ACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTT 140708
|||| ||| || ||||| ||||| | || || | ||| ||||| | ||| | ||||||
Sbjct 3142915 TTTT-GCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTCTTT 3142857
Query 140709 CCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| | || || || |||||||||||
Sbjct 3142856 CCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828
Score = 118 bits (130), Expect = 3e-21
Identities = 137/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 140553 TGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGA 140612
||||| || || ||||| | || || || ||||| || || || ||||||||||| | |
Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212
Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672
|| ||||| ||||||||||| || || || |||||||| || | || || || || ||
Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 3142152
Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732
| |||||| | || || ||||| || | ||||| || || || || || || || |||
Sbjct 3142151 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 3142092
Query 140733 TGCAT 140737
|||||
Sbjct 3142091 TGCAT 3142087
>seq4
Length=4274674
Score = 86.0 bits (94), Expect = 2e-11
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
|| || || || || || || | || || ||||||||||| || ||||| ||||||||
Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATC 2700820
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
||||| ||||| || || || || || || || ||||| || || | || ||||| ||
Sbjct 2700821 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2700880
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729
|| | || || | || || || || || | ||||| || || || || || || |||
Sbjct 2700881 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAA 2700940
>seq2
Length=6009755
Score = 84.2 bits (92), Expect = 7e-11
Identities = 95/127 (75%), Gaps = 3/127 (2%)
Strand=Plus/Plus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| || |||||| | ||||| ||| || || |||||| |||||||||||||||||
Sbjct 4981097 CGAGGAACACCAAGAGTAACGTTC---TTGGAACTAACACCGGCAAAGTGGAAAGTATTC 4981153
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
| ||| | || |||| ||||| || || || || || || | ||| || |||||||||
Sbjct 4981154 AAAGTCATCTGTGTAGCAGGCTCTCCGATAGATTGGGCGGCTAGAACACCGACCATTTCT 4981213
Query 377578 CCAGGAT 377584
|| ||||
Sbjct 4981214 CCTGGAT 4981220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515254225272227
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |