Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 212 7e-50 seq2 84.2 2e-11 >seq1 Length=7684667 Score = 212 bits (234), Expect = 7e-50 Identities = 507/759 (67%), Gaps = 16/759 (2%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || ||| | ||||| ||||| || || | | | | |||||| ||| Sbjct 4027140 TCATGCGTGTTGCCGTTGGTATTCACGGCGAGAACATCGAGAAAGCCATTGAGACATACA 4027081 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 |||| ||| || || ||||| || ||||| | || || |||||||||| ||||| Sbjct 4027080 ACTTGATGTCTCAGAAATACTTCACACACGCGTCTCCCACTTTGTTCAACGCAGGTACTC 4027021 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 || || ||| | | |||||||| |||| |||||||| ||| || || || | Sbjct 4027020 CTCGACCACAGCTTGCTTCTTGCTTCCTTGTGGACATGAAGGAAGACAGCATTGAGGGTA 4026961 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 |||| || || |||||| ||||| |||||||||| | |||||||| ||| || Sbjct 4026960 TCTATGATACTCTCAAGACATGTGCAATGATCTCCAAGTCTGCCGGTGGTATTGGTCTCA 4026901 Query 53433 ACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 | || || | || ||||| | | || | ||| || || || || | | Sbjct 4026900 A-TG-TCCACCGCATCCGTTCCACTGGTTCCTACATCGGAGGAACCAATGGTACTTCAAA 4026843 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || | |||||||||||| | || ||||||||||| ||| | |||||| |||| || || Sbjct 4026842 CGGTCTTGTGCCTATGCTCAGAGTGTTCAACAACACCGCCAGATACGTCGACCAAGGAGG 4026783 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 | |||||| || |||| || |||||||||||||| |||||| | || || | || Sbjct 4026782 TAACAAGCGCCCTGGTGCGTTTGCTATCTACCTCGAGCCCTGGCACTCGGATGTTTTTGA 4026723 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670 ||| || || || || ||| || || | ||||| | || |||||| ||||| Sbjct 4026722 GTTCCTTGACCTTCGCAAGAACCATGGCAAAGAAGAAGTCCGTGCCCGTGATCTGTTCTA 4026663 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAG--GACGAGGAGTGGTAC 53728 || |||||| || || |||||||||| ||| ||||| || |||| ||| Sbjct 4026662 TGCCTTGTGGACCCCTGATCTCTTCATGC--GTCGTGTAGAAGCCAACCAGGACTGGACA 4026605 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788 || | ||||| |||||| |||| || | |||||||| || |||||| | | Sbjct 4026604 TTGTTCTGCCCTAACGAGGCTTCCGGTCTTGCCGACGTCTACGGCGAAGAGTTTGATGCT 4026545 Query 53789 ATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAG----AAGGTCAAGGCGCGTGA 53844 |||| || ||||| || |||| | | | | | |||||||| | | Sbjct 4026544 TTGTACGAGAAGTACG-AG---AGGGAAGGTCGTGGTCGTCGTACCGTCAAGGCTCAGAA 4026489 Query 53845 GGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAA 53904 | | ||| | || |||||| || ||| ||||| || | |||| |||| |||||| Sbjct 4026488 GCTCTGGTACGCCATCCTCGAGGCTCAGACTGAGACTGGTAACCCGTTCATGCTCTACAA 4026429 Query 53905 GGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 |||| | |||| ||||||||||||| |||||| |||| Sbjct 4026428 GGATGCTTGCAACAAGAAGAGCAACCAAAAGAACCTCGG 4026390 Score = 82.4 bits (90), Expect = 8e-11 Identities = 168/241 (70%), Gaps = 9/241 (4%) Strand=Plus/Minus Query 55689 ACGGGGGGTCCGTCCAGA--ATCTGGAGATTCCTCTGC-GTC-TCAAGGAGATTTACCGG 55744 |||| || |||||||||| ||| | ||| |||| | | |||||| | ||| | Sbjct 4025664 ACGGCGGATCCGTCCAGAACATCCCCAACATCC-CTGCTGACATCAAGGCTCTCTACAAG 4025606 Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTC--TGATTGACATGAGTGCTGATCGTGGTGCGT 55802 || || |||||||| | ||| || || | || | ||| |||||| |||||||| | Sbjct 4025605 ACTGTCTGGGAGATCTCTCAG-CGA-TCGATCCTTCAGATGGCTGCTGACCGTGGTGCTT 4025548 Query 55803 ACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGA 55862 |||| |||||||| || || || || ||| |||| || | || | ||| |||| | | Sbjct 4025547 ACATTGACCAGTCTCAATCCCTCAATATCCACATGAAGGAACCCACTATGGGCAAGATCA 4025488 Query 55863 GCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGA 55922 | ||||| ||| || ||||||| |||| | ||||| || |||||||| |||| | Sbjct 4025487 CCAGTATGCATTTTGCTGGTTGGAAGATGGGATTGAAGACTGGAATGTACTACTTGCGTA 4025428 Query 55923 C 55923 | Sbjct 4025427 C 4025427 >seq2 Length=6009755 Score = 84.2 bits (92), Expect = 2e-11 Identities = 134/191 (70%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 119000 ACCTTGCTCATGTTGTCGGTCCAAGATTGCATGTAGATCTT---CTTAC---CATCACTA 119053 ||||||||||| ||||| ||||| | ||||| || | || || || |||| Sbjct 1495128 ACCTTGCTCATATTGTCCGTCCATGTTTGCACATATTTTTTGCCCTGACGAGAATCAACG 1495187 Query 119054 ATTTTGATGTTAAATTTCGAACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGA 119113 | | |||| |||||| || | || ||||| |||||| |||||| | ||||| ||| Sbjct 1495188 GTCTCGATGCTAAATTCCGTAGAAAAGACGTTACATAGCTTAGCACCGAAACCGTTACGA 1495247 Query 119114 CCACCGGTCACGCGCTGCTCCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAG 119173 ||||| || || | || | || | |||||| ||| ||||| |||||| ||||| Sbjct 1495248 CCACCCGTTACCTTCATCTGTCCATCATCGTAGTTCGAGGAGGTCAGAAGGTGGCCAAAA 1495307 Query 119174 ATGAGCTCggg 119184 |||||||| || Sbjct 1495308 ATGAGCTCAGG 1495318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215938438200