Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq6 203 4e-47
seq4 123 3e-23
seq1 111 2e-19
>seq6
Length=3820271
Score = 203 bits (224), Expect = 4e-47
Identities = 181/227 (80%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||||||||| |||||||||||||| || || |||||||| ||||| |
Sbjct 3142372 ATGCAAATCTTTGTCAAGACTCTTACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTCT 3142431
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | || |||||||| |||||||| || ||||| ||||||
Sbjct 3142432 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 3142491
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || ||||| ||||| |||||||| | |||||||| | ||||| ||
Sbjct 3142492 CAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 3142551
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || |||||||||||||| || ||| | ||||| || |||||
Sbjct 3142552 ATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGG 3142598
Score = 152 bits (168), Expect = 6e-32
Identities = 143/182 (79%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| ||||| |||||||| || || || ||||| || || |||||||| |||||
Sbjct 3142084 ATCATGCAGATCTTCGTCAAGACCCTCACTGGGAAGACCATCACCCTTGAGGTGGAGTCT 3142143
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
||||| ||| | || | ||| | || ||||||||||||||||| |||||||| |||
Sbjct 3142144 TCTGATACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGAC 3142203
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
||||||||| | || |||||||| ||||| ||||| || | ||| ||||| | |||||
Sbjct 3142204 CAGCAGCGTTTGATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTTTCTGACTAC 3142263
Query 27583 AA 27584
||
Sbjct 3142264 AA 3142265
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| || || || ||||| || || | || || || ||
Sbjct 3142600 ATGCAAATCTTCGTTAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 3142659
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | ||||| || ||||| || || |||||||| ||||||
Sbjct 3142660 GACACCATCGATAACGTCAAGTCCAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCAG 3142719
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | ||||| |||||||||||||| || |||| ||||| || | ||||| ||
Sbjct 3142720 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAAC 3142779
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||||||||||||||| || || || | ||||| || |||||
Sbjct 3142780 ATTCAAAAGGAATCCACTCTACACCTTGTACTCCGTCTCCGAGGTGG 3142826
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | ||||| |||||||| || | || || || ||
Sbjct 3142828 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACTATCACATTGGAAGTCGAATCGTCA 3142887
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| ||||| ||||| || || |||||||| || || || ||||||
Sbjct 3142888 GACACCATTGACAATGTGAAGAGCAAAATCCAAGATAAGGAGGGTATCCCACCCGACCAG 3142947
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | |||||||||||||||||||| || |||| ||| || || | || || ||
Sbjct 3142948 CAGCGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTCGCACTCTTTCTGATTACAAC 3143007
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| ||||| | || | ||||| ||||||||
Sbjct 3143008 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGTCTCCGCGGTGG 3143054
>seq4
Length=4274674
Score = 123 bits (136), Expect = 3e-23
Identities = 136/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || |||||||| || || || ||||| ||||| || | |||
Sbjct 2700939 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATC 2700880
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || || |||||||||||||| || || || ||||||||||||||
Sbjct 2700879 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 2700820
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||| || ||||| || || |||| ||| || || | ||||| || |||| |||
Sbjct 2700819 ATCTTTGCCGGAAAGCAGCTTGAAGATGGTCGCACTCTCTCCGACTACAACATCCAGAAG 2700760
Query 27595 G 27595
|
Sbjct 2700759 G 2700759
>seq1
Length=7684667
Score = 111 bits (122), Expect = 2e-19
Identities = 769/1228 (63%), Gaps = 27/1228 (2%)
Strand=Plus/Plus
Query 80540 CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACG 80599
|||||||||||| |||||||| |||| || | ||||| ||| || | |||||||| |
Sbjct 4025935 CCCACATGTCGTATTGCAAGATACCCTGGGAGACAGGAGAGCCCTCGTAGGTCTCGTAAG 4025994
Query 80600 GGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAA 80659
||| | | |||||| || || || | | | ||| |||| || || |||||
Sbjct 4025995 TGCCGTACTCCTTGGCAAGTTCGACGGAGGCAGTCAAGGCACCGTGGTAGATTGTCTCAA 4026054
Query 80660 AGACGCCCTTGTTCACACCGCGCG-CCTGTGGGTCGTCGAACGACAAGCCCATCATCATG 80718
| | |||||| | || | ||| || |||||| | | || | | |
Sbjct 4026055 AAATCTGGATGTTCA-ATTGCTTGGCCTCCGGAGAGTCGAAAGGAAGGCGGAGAGCAAGG 4026113
Query 80719 AACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG- 80777
|| | ||||| || || | || || | || || || ||||| || ||| | ||
Sbjct 4026114 AAAGCATCAGCAAGACCATTCACACCAACTGCAATAGGACGGTGACGGAAGTT-GCTCTT 4026172
Query 80778 CTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAAC 80837
|| |||||| || | ||||| |||| | ||||||| ||| |||||||| ||
Sbjct 4026173 CTTGGCCTCAGGCACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGGTTGCGCACAAG 4026232
Query 80838 AACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT-------TCA-CA 80889
||| | || || || || | ||| |||||| | | | || | ||| ||
Sbjct 4026233 CACCTGGGTGACTTCGTGCAATTTACCAAAGTCATACTCG--CCACGAGCGGTATCAACA 4026290
Query 80890 AATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAAC 80949
|| | ||||| ||||| |||| |||||| || || ||||| |||| | | |
Sbjct 4026291 AAGGTAGGAAGAGCAAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTAT 4026350
Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009
|| | || || ||||| | || ||| || ||||| ||||| || ||||| |
Sbjct 4026351 TCAATAATCTCTGTGCAGAGGTTGGAACTACGGATAGTACCGAGGTTCTTTTGGTTGCTC 4026410
Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069
|| ||||||||| ||||||||| |||| ||||| |||| ||||| ||| | || |
Sbjct 4026411 TTCTTGTTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCG 4026470
Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGAC--CACCTTGCGGAATTTG-CCTTCGGCC 81126
|||||||||| ||| | || | |||||||| || | || | ||||| |
Sbjct 4026471 AGGATGGCGTACCAGAGCTTCTGAGCCTTGACGGTAC---GACGACCACGACCTTCCCTC 4026527
Query 81127 ACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCAC 81186
| ||||| |||| | || |||| | |||| | || | || | | |
Sbjct 4026528 TCGTACTTCTCGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCC 4026587
Query 81187 TCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCA 81246
||||||||||| | || |||||| || | |||||| |||||| |||
Sbjct 4026588 TCGTTAGGGCAGAACAATGTCCAGTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCA 4026647
Query 81247 GGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGG 81306
||| |||| | ||| |||||| || ||| || | || || | || ||||| |
Sbjct 4026648 GGGGTCCACAAGGCATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCTTG 4026707
Query 81307 CGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGAC 81366
|| | || || || || | | |||| ||||| ||||| || || | || | ||
Sbjct 4026708 CGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCA 4026767
Query 81367 CCCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAAC 81423
|| ||| | || || |||| |||||| | ||| || ||| || || | | |
Sbjct 4026768 CCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGC 4026827
Query 81424 ATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGC 81483
||||| | | ||| | ||| ||| || || || |||| || || ||| ||
Sbjct 4026828 ATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGG 4026887
Query 81484 A--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541
| | || |||| ||||| || ||||| | |||| || ||| ||||| |
Sbjct 4026888 ATGCGGTGGACATTG--AGACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCT 4026945
Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601
| | || ||||| || ||||| ||||| |||| |||||||| | | ||| || |
Sbjct 4026946 TGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAG 4027005
Query 81602 ACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAAC 81661
| ||| || | | || || ||||||| || || | |||||| |||| ||
Sbjct 4027006 CAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATT 4027065
Query 81662 GGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGA 81721
| ||||||| || || || || || | || | || ||||||||||| |
Sbjct 4027066 TCTGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAA 4027125
Query 81722 TAGCTACACGCATAAACATGTACTGGGG 81749
|| |||||||| | ||||| |||||
Sbjct 4027126 CGGCAACACGCATGATCATGTGTTGGGG 4027153
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| || || || |||||||||||| | || || || || ||||| |||||
Sbjct 2663349 GACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAA 2663290
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | || ||||| | ||||| || |||| ||||| ||||||||||| | ||| |
Sbjct 2663289 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTC 2663230
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 2663229 CGCCTCCGTGGTGG 2663216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310335840080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |