Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq6 203 4e-47 seq4 123 3e-23 seq1 111 2e-19 >seq6 Length=3820271 Score = 203 bits (224), Expect = 4e-47 Identities = 181/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| |||||||||||||| || || |||||||| ||||| | Sbjct 3142372 ATGCAAATCTTTGTCAAGACTCTTACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTCT 3142431 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || |||||||| |||||||| || ||||| |||||| Sbjct 3142432 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 3142491 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || ||||| ||||| |||||||| | |||||||| | ||||| || Sbjct 3142492 CAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 3142551 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || |||||||||||||| || ||| | ||||| || ||||| Sbjct 3142552 ATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGG 3142598 Score = 152 bits (168), Expect = 6e-32 Identities = 143/182 (79%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || || ||||| || || |||||||| ||||| Sbjct 3142084 ATCATGCAGATCTTCGTCAAGACCCTCACTGGGAAGACCATCACCCTTGAGGTGGAGTCT 3142143 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||||| ||| | || | ||| | || ||||||||||||||||| |||||||| ||| Sbjct 3142144 TCTGATACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGAC 3142203 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||| | || |||||||| ||||| ||||| || | ||| ||||| | ||||| Sbjct 3142204 CAGCAGCGTTTGATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTTTCTGACTAC 3142263 Query 27583 AA 27584 || Sbjct 3142264 AA 3142265 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || || || ||||| || || | || || || || Sbjct 3142600 ATGCAAATCTTCGTTAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 3142659 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | ||||| || ||||| || || |||||||| |||||| Sbjct 3142660 GACACCATCGATAACGTCAAGTCCAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCAG 3142719 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| |||||||||||||| || |||| ||||| || | ||||| || Sbjct 3142720 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAAC 3142779 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||||||||| || || || | ||||| || ||||| Sbjct 3142780 ATTCAAAAGGAATCCACTCTACACCTTGTACTCCGTCTCCGAGGTGG 3142826 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | ||||| |||||||| || | || || || || Sbjct 3142828 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACTATCACATTGGAAGTCGAATCGTCA 3142887 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| ||||| ||||| || || |||||||| || || || |||||| Sbjct 3142888 GACACCATTGACAATGTGAAGAGCAAAATCCAAGATAAGGAGGGTATCCCACCCGACCAG 3142947 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | |||||||||||||||||||| || |||| ||| || || | || || || Sbjct 3142948 CAGCGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTCGCACTCTTTCTGATTACAAC 3143007 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| ||||| | || | ||||| |||||||| Sbjct 3143008 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGTCTCCGCGGTGG 3143054 >seq4 Length=4274674 Score = 123 bits (136), Expect = 3e-23 Identities = 136/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || |||||||| || || || ||||| ||||| || | ||| Sbjct 2700939 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATC 2700880 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || |||||||||||||| || || || |||||||||||||| Sbjct 2700879 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 2700820 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||| || ||||| || || |||| ||| || || | ||||| || |||| ||| Sbjct 2700819 ATCTTTGCCGGAAAGCAGCTTGAAGATGGTCGCACTCTCTCCGACTACAACATCCAGAAG 2700760 Query 27595 G 27595 | Sbjct 2700759 G 2700759 >seq1 Length=7684667 Score = 111 bits (122), Expect = 2e-19 Identities = 769/1228 (63%), Gaps = 27/1228 (2%) Strand=Plus/Plus Query 80540 CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACG 80599 |||||||||||| |||||||| |||| || | ||||| ||| || | |||||||| | Sbjct 4025935 CCCACATGTCGTATTGCAAGATACCCTGGGAGACAGGAGAGCCCTCGTAGGTCTCGTAAG 4025994 Query 80600 GGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAA 80659 ||| | | |||||| || || || | | | ||| |||| || || ||||| Sbjct 4025995 TGCCGTACTCCTTGGCAAGTTCGACGGAGGCAGTCAAGGCACCGTGGTAGATTGTCTCAA 4026054 Query 80660 AGACGCCCTTGTTCACACCGCGCG-CCTGTGGGTCGTCGAACGACAAGCCCATCATCATG 80718 | | |||||| | || | ||| || |||||| | | || | | | Sbjct 4026055 AAATCTGGATGTTCA-ATTGCTTGGCCTCCGGAGAGTCGAAAGGAAGGCGGAGAGCAAGG 4026113 Query 80719 AACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG- 80777 || | ||||| || || | || || | || || || ||||| || ||| | || Sbjct 4026114 AAAGCATCAGCAAGACCATTCACACCAACTGCAATAGGACGGTGACGGAAGTT-GCTCTT 4026172 Query 80778 CTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAAC 80837 || |||||| || | ||||| |||| | ||||||| ||| |||||||| || Sbjct 4026173 CTTGGCCTCAGGCACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGGTTGCGCACAAG 4026232 Query 80838 AACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT-------TCA-CA 80889 ||| | || || || || | ||| |||||| | | | || | ||| || Sbjct 4026233 CACCTGGGTGACTTCGTGCAATTTACCAAAGTCATACTCG--CCACGAGCGGTATCAACA 4026290 Query 80890 AATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAAC 80949 || | ||||| ||||| |||| |||||| || || ||||| |||| | | | Sbjct 4026291 AAGGTAGGAAGAGCAAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTAT 4026350 Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009 || | || || ||||| | || ||| || ||||| ||||| || ||||| | Sbjct 4026351 TCAATAATCTCTGTGCAGAGGTTGGAACTACGGATAGTACCGAGGTTCTTTTGGTTGCTC 4026410 Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069 || ||||||||| ||||||||| |||| ||||| |||| ||||| ||| | || | Sbjct 4026411 TTCTTGTTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCG 4026470 Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGAC--CACCTTGCGGAATTTG-CCTTCGGCC 81126 |||||||||| ||| | || | |||||||| || | || | ||||| | Sbjct 4026471 AGGATGGCGTACCAGAGCTTCTGAGCCTTGACGGTAC---GACGACCACGACCTTCCCTC 4026527 Query 81127 ACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCAC 81186 | ||||| |||| | || |||| | |||| | || | || | | | Sbjct 4026528 TCGTACTTCTCGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCC 4026587 Query 81187 TCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCA 81246 ||||||||||| | || |||||| || | |||||| |||||| ||| Sbjct 4026588 TCGTTAGGGCAGAACAATGTCCAGTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCA 4026647 Query 81247 GGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGG 81306 ||| |||| | ||| |||||| || ||| || | || || | || ||||| | Sbjct 4026648 GGGGTCCACAAGGCATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCTTG 4026707 Query 81307 CGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGAC 81366 || | || || || || | | |||| ||||| ||||| || || | || | || Sbjct 4026708 CGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCA 4026767 Query 81367 CCCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAAC 81423 || ||| | || || |||| |||||| | ||| || ||| || || | | | Sbjct 4026768 CCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGC 4026827 Query 81424 ATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGC 81483 ||||| | | ||| | ||| ||| || || || |||| || || ||| || Sbjct 4026828 ATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGG 4026887 Query 81484 A--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541 | | || |||| ||||| || ||||| | |||| || ||| ||||| | Sbjct 4026888 ATGCGGTGGACATTG--AGACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCT 4026945 Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601 | | || ||||| || ||||| ||||| |||| |||||||| | | ||| || | Sbjct 4026946 TGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAG 4027005 Query 81602 ACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAAC 81661 | ||| || | | || || ||||||| || || | |||||| |||| || Sbjct 4027006 CAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATT 4027065 Query 81662 GGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGA 81721 | ||||||| || || || || || | || | || ||||||||||| | Sbjct 4027066 TCTGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAA 4027125 Query 81722 TAGCTACACGCATAAACATGTACTGGGG 81749 || |||||||| | ||||| ||||| Sbjct 4027126 CGGCAACACGCATGATCATGTGTTGGGG 4027153 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || |||||||||||| | || || || || ||||| ||||| Sbjct 2663349 GACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAA 2663290 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || ||||| | ||||| || |||| ||||| ||||||||||| | ||| | Sbjct 2663289 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTC 2663230 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 2663229 CGCCTCCGTGGTGG 2663216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310335840080