Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq6 105 5e-18
seq4 89.7 3e-13
>seq6
Length=3820271
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || |||||||| || ||||| ||||| |||||||| | ||||| || ||| |
Sbjct 3142600 ATGCAAATCTTCGTTAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 3142659
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || ||||| ||||||||||| | || || || ||
Sbjct 3142660 GACACCATCGATAACGTCAAGTCCAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCAG 3142719
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| || || || || || || ||||| ||||| | || ||| | ||| ||||||
Sbjct 3142720 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAAC 3142779
Query 23791 ATACAAAAAGAGTCCACATTACA 23813
|| ||||| || ||||| ||||
Sbjct 3142780 ATTCAAAAGGAATCCACTCTACA 3142802
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||| | || ||||| || ||||| | ||||| || || |
Sbjct 3142828 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACTATCACATTGGAAGTCGAATCGTCA 3142887
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | ||||| || || || ||| | || || || ||
Sbjct 3142888 GACACCATTGACAATGTGAAGA-GCAAAATCCAAGATAAGGAGGGTATCCCACCCGACCA 3142946
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || || ||||| || || ||||| ||||| | |||||| | ||||||||
Sbjct 3142947 GCAGCGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTCGCACTCTTTCTGATTACAA 3143006
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 3143007 CATCCAGAAGGAGTCCAC 3143024
>seq4
Length=4274674
Score = 89.7 bits (98), Expect = 3e-13
Identities = 130/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678
|||||| || ||||||||||| || || ||||| ||||| || || ||| | ||||| |
Sbjct 2700940 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCAT 2700881
Query 23679 TGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTT 23737
|| ||| | || | || || ||||| || ||| | || || || || ||||||
Sbjct 2700880 CGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTC 2700822
Query 23738 TAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAA 23797
| || |||||||| || || || ||||| | |||||| | ||| |||||||| || |
Sbjct 2700821 TGATCTTTGCCGGAAAGCAGCTTGAAGATGGTCGCACTCTCTCCGACTACAACATCCAGA 2700762
Query 23798 A 23798
|
Sbjct 2700761 A 2700761
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009562924572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |