Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq6 167 6e-36
seq9 132 1e-25
seq4 125 2e-23
>seq6
Length=3820271
Score = 167 bits (184), Expect = 6e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| |||||||| ||||||||||| ||||| | ||||| |||| | ||| | ||||||
Sbjct 3142811 AGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTACGGCCATCT 3142752
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| |||||||| || | ||| || ||||| || ||||| ||||| ||||||
Sbjct 3142751 TCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCTTTGTCT 3142692
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||| || ||| || |||||||||||||||| ||| || || || |||||||||
Sbjct 3142691 TGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTC 3142632
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||| || | ||| | ||||||
Sbjct 3142631 TTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||| |||||||||||||| |||| ||||| |||| | || | || ||
Sbjct 3142583 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCC 3142524
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| | || || ||||| || || ||||| ||||| ||
Sbjct 3142523 TCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATCC 3142464
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || ||||||||||| |||| ||||| || | ||||| |||
Sbjct 3142463 TGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTC 3142404
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||| || | || | ||||||
Sbjct 3142403 TTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || ||||| || || |||| |||||||| | | ||| | ||||||
Sbjct 3143039 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCT 3142980
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
||||| ||||| ||||| || || | ||| || |||||||| || ||||| ||||| |||
Sbjct 3142979 TCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCT 3142920
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||| || ||||||| || ||||||||||| | ||| || || || ||||| |||
Sbjct 3142919 TGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTC 3142860
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||| || || | ||| | |||||
Sbjct 3142859 TTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828
>seq9
Length=31729
Score = 132 bits (146), Expect = 1e-25
Identities = 192/268 (72%), Gaps = 5/268 (2%)
Strand=Plus/Minus
Query 7447 TATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGG 7506
|||||||| |||| ||||||||| | || || || |||||| | |||||||
Sbjct 25053 TATTTAATGTTTGCATTATTTTCTGGTTTAATTGGAACAGCTTTTTCTGTACTTATAAGA 24994
Query 7507 TTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAG-TGGTAATAGCCAACTTTACAACGT 7565
||||||||| | ||||| ||| ||| ||| || || |||| ||| | || ||
Sbjct 24993 TTAGAATTATCAGCTCCAGGTGTGCAA-TATATAGCTGATAAT---CAATTATATAATAG 24938
Query 7566 TATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGG 7625
||| ||||| || ||||| | | |||||||||||| | |||||||| | | | |||||
Sbjct 24937 TATAATTACAGCTCATGCTATATTAATGATTTTCTTTATGGTTATGCCTGCTTTAATAGG 24878
Query 7626 CGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAG 7685
|| || || |||| || | |||||| | | || | |||||| ||||| ||||| ||
Sbjct 24877 TGGATTTGGTAATTTTTTATTACCTTTATTAGTAGGAGGTCCTGACATGGCATTTCCTAG 24818
Query 7686 GCTTAACAATATAAGTTTTTGATTACTA 7713
| || ||||||||||| |||||| ||
Sbjct 24817 ATTAAATAATATAAGTTTCTGATTATTA 24790
Score = 89.7 bits (98), Expect = 1e-12
Identities = 83/103 (81%), Gaps = 2/103 (2%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
||| ||||| ||||| |||||||| | |||||| | | |||||||| || || ||||
Sbjct 24379 TTCTGGATGCCCAAAGAATCAGAAAAGATGTTGGAATAATATAGGATCACCACCACCTGC 24438
Query 370732 TGGATCAAA-AAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
|| ||||| |||| | || |||||||||||||||||||||||
Sbjct 24439 TGCTTCAAAGAAAGAT-GTGTTAAAATTTCTATCAGTTAAAAC 24480
>seq4
Length=4274674
Score = 125 bits (138), Expect = 2e-23
Identities = 126/164 (77%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| | ||| | |||||||| |||||||| || || |||||
Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATC 2700820
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || |||||||| || ||||| |||||||| |||||||| ||| ||| |||
Sbjct 2700821 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2700880
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|||||||| |||| || || || | ||||| |||||||||||
Sbjct 2700881 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 2700924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192531062486246
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |