Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1 143 4e-29
seq2 93.3 6e-14
>seq1
Length=7684667
Score = 143 bits (158), Expect = 4e-29
Identities = 729/1145 (64%), Gaps = 24/1145 (2%)
Strand=Plus/Plus
Query 77685 GATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA-TATTGTATTATCTCGGTACA 77743
|| || | ||| || || || ||||||| || | || |||| || ||||| || ||
Sbjct 4026309 GAAGCCAAATTGCAGACAGCAACCTCATCAG-GAGCACAGTATTCAATAATCTCTGTGCA 4026367
Query 77744 TAGATT---ACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGA 77800
|| || ||||| |||||| || || || | |||||||||||| || ||||| |
Sbjct 4026368 GAGGTTGGAACTACG---GATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTGTTGCAAGC 4026424
Query 77801 GTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCA 77860
||||| || || || ||||| | || || ||| |||| | |||| || | | |||
Sbjct 4026425 ATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCGTACCA 4026484
Query 77861 GACGACTCT-AGCTTTTATCATA-GATTTGTATCGCCTCTCTCTTTCATATTGA--GTAT 77916
|| | ||| ||| || | || || | ||| || || || || | |||
Sbjct 4026485 GA-GCTTCTGAGCCTTGACGGTACGACGACCACGACCT-TCCCTCTCGTACTTCTCGTAC 4026542
Query 77917 ATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACA 77976
| ||| ||||| || || || | || || | | || | || || ||||| |
Sbjct 4026543 AAAGCA--TCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTAGGGCAGA 4026600
Query 77977 TCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAG 78036
||||| |||||| | | | || || ||| ||||||||||| |||| | |
Sbjct 4026601 ACAATGTCCAGTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCAGGGGTCCACAAGG 4026660
Query 78037 CAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAA 78096
|| || ||||| |||| | |||||| || || ||||| ||| || || |
Sbjct 4026661 CATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCTTGCGAAGGTCAAGGA 4026720
Query 78097 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTAT 78156
|||| | || ||| || ||||| || || || || || || | | ||||| || || |
Sbjct 4026721 ACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCACCAGGGCGCTTGT 4026780
Query 78157 TACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 78216
||||||| || || | |||||||||||||| || | ||||| | ||| || | || ||
Sbjct 4026781 TACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGGCACAAGAC 4026840
Query 78217 CGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAAT 78274
|||| || || ||||| ||||| || || ||| | | || || | ||
Sbjct 4026841 CGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGGACAT 4026900
Query 78275 GGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTA 78334
|| | || || || || || ||| || || | || || || | ||||| ||
Sbjct 4026901 TGAGA--CCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCTTGAGAGTATCATA 4026958
Query 78335 GATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATG 78394
||||||||| || ||||| ||| |||||| | ||| || || || | || | |
Sbjct 4026959 GATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCG 4027018
Query 78395 AACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAG 78454
| ||| ||||| || || || || ||||| || || || || |||| | ||| | |
Sbjct 4027019 AGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGAGACATCAA 4027078
Query 78455 ATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCAT 78514
|||||||| ||||| ||| || |||| | ||||| || || || ||||||||
Sbjct 4027079 GTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAACGGCAACACGCAT 4027138
Query 78515 CAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 78574
| ||| || || || | ||| | ||| ||| ||| | | | ||| || |||
Sbjct 4027139 GATCATGTGTTGGGGACGTTCGGCAACCTTGCCATTGATTCTGAGGAGGTAGGAGCGTTC 4027198
Query 78575 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATT 78634
| ||| || ||||| || || | || ||||| | || |||| ||| | || ||
Sbjct 4027199 GAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGTCACGGTCATAAACAATGGCCGAGTT 4027258
Query 78635 TAGTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTT--GAAATAATAGGAGAT 78692
| || ||| | || | ||| | | ||| ||| | | ||||| || || ||
Sbjct 4027259 CAATTCTTCTGCATGCTTCATGACAGTCT-CAT-ACATCTGATCCGAAATCATGGGTAAT 4027316
Query 78693 CGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGt 78752
| || || || || || |||| | | |||||| || ||| || ||| |
Sbjct 4027317 GCCTTATTGTTCTTGGGGTTGACGTAGTGGTACAGATCTTCAATCACAGCAGAAAACTGC 4027376
Query 78753 ttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCA 78812
|| || || | ||||||||| || || || || || | || || || | ||| |||||
Sbjct 4027377 TTCTTGGTCTGCTTGTGTAGGTTGGAGACGGCGATACGAGCGGCGAGGACAGCGTAATCC 4027436
Query 78813 GGATG 78817
|| ||
Sbjct 4027437 GGGTG 4027441
>seq2
Length=6009755
Score = 93.3 bits (102), Expect = 6e-14
Identities = 185/272 (68%), Gaps = 4/272 (1%)
Strand=Plus/Minus
Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497
||||||||||| || || || ||||| || || || || |||| ||||| | |||
Sbjct 3197010 TCGGAGTGAATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCTTCAGGAATC 3196951
Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557
|| || || || || || ||| |||| |||||||| || || |||||| ||||||
Sbjct 3196950 TGAACTTCACCACTGAAACGCTCAACCAAGTTCTCATTGACGATACCATCAGAGGCAGCA 3196891
Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAG 48614
|| || || | || || ||||| || ||| | | ||| | || ||||||
Sbjct 3196890 AAGAAGGCGAGGACGTGCGAGATAAAGTAGCGTTCATCGTCGTTCAGACGGTTGTTCCAG 3196831
Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674
|| | | |||||| || | ||| | ||||| || ||||| || || || || || ||
Sbjct 3196830 TCGTGCAAATCTTTCGAGAGATCGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTTC 3196771
Query 48675 TTATACATATTCCATATATCACTGTATTGGAT 48706
|| ||||| | ||| || | | |||| ||||
Sbjct 3196770 TTGTACATTTGCCAGATCTGA-TGTAGAGGAT 3196740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668721849760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |