Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 143 4e-29 seq2 93.3 6e-14 >seq1 Length=7684667 Score = 143 bits (158), Expect = 4e-29 Identities = 729/1145 (64%), Gaps = 24/1145 (2%) Strand=Plus/Plus Query 77685 GATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA-TATTGTATTATCTCGGTACA 77743 || || | ||| || || || ||||||| || | || |||| || ||||| || || Sbjct 4026309 GAAGCCAAATTGCAGACAGCAACCTCATCAG-GAGCACAGTATTCAATAATCTCTGTGCA 4026367 Query 77744 TAGATT---ACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGA 77800 || || ||||| |||||| || || || | |||||||||||| || ||||| | Sbjct 4026368 GAGGTTGGAACTACG---GATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTGTTGCAAGC 4026424 Query 77801 GTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCA 77860 ||||| || || || ||||| | || || ||| |||| | |||| || | | ||| Sbjct 4026425 ATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCGTACCA 4026484 Query 77861 GACGACTCT-AGCTTTTATCATA-GATTTGTATCGCCTCTCTCTTTCATATTGA--GTAT 77916 || | ||| ||| || | || || | ||| || || || || | ||| Sbjct 4026485 GA-GCTTCTGAGCCTTGACGGTACGACGACCACGACCT-TCCCTCTCGTACTTCTCGTAC 4026542 Query 77917 ATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACA 77976 | ||| ||||| || || || | || || | | || | || || ||||| | Sbjct 4026543 AAAGCA--TCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTAGGGCAGA 4026600 Query 77977 TCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAG 78036 ||||| |||||| | | | || || ||| ||||||||||| |||| | | Sbjct 4026601 ACAATGTCCAGTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCAGGGGTCCACAAGG 4026660 Query 78037 CAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAA 78096 || || ||||| |||| | |||||| || || ||||| ||| || || | Sbjct 4026661 CATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCTTGCGAAGGTCAAGGA 4026720 Query 78097 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTAT 78156 |||| | || ||| || ||||| || || || || || || | | ||||| || || | Sbjct 4026721 ACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCACCAGGGCGCTTGT 4026780 Query 78157 TACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 78216 ||||||| || || | |||||||||||||| || | ||||| | ||| || | || || Sbjct 4026781 TACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGGCACAAGAC 4026840 Query 78217 CGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAAT 78274 |||| || || ||||| ||||| || || ||| | | || || | || Sbjct 4026841 CGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGGACAT 4026900 Query 78275 GGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTA 78334 || | || || || || || ||| || || | || || || | ||||| || Sbjct 4026901 TGAGA--CCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCTTGAGAGTATCATA 4026958 Query 78335 GATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATG 78394 ||||||||| || ||||| ||| |||||| | ||| || || || | || | | Sbjct 4026959 GATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCG 4027018 Query 78395 AACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAG 78454 | ||| ||||| || || || || ||||| || || || || |||| | ||| | | Sbjct 4027019 AGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGAGACATCAA 4027078 Query 78455 ATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCAT 78514 |||||||| ||||| ||| || |||| | ||||| || || || |||||||| Sbjct 4027079 GTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAACGGCAACACGCAT 4027138 Query 78515 CAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 78574 | ||| || || || | ||| | ||| ||| ||| | | | ||| || ||| Sbjct 4027139 GATCATGTGTTGGGGACGTTCGGCAACCTTGCCATTGATTCTGAGGAGGTAGGAGCGTTC 4027198 Query 78575 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATT 78634 | ||| || ||||| || || | || ||||| | || |||| ||| | || || Sbjct 4027199 GAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGTCACGGTCATAAACAATGGCCGAGTT 4027258 Query 78635 TAGTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTT--GAAATAATAGGAGAT 78692 | || ||| | || | ||| | | ||| ||| | | ||||| || || || Sbjct 4027259 CAATTCTTCTGCATGCTTCATGACAGTCT-CAT-ACATCTGATCCGAAATCATGGGTAAT 4027316 Query 78693 CGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGt 78752 | || || || || || |||| | | |||||| || ||| || ||| | Sbjct 4027317 GCCTTATTGTTCTTGGGGTTGACGTAGTGGTACAGATCTTCAATCACAGCAGAAAACTGC 4027376 Query 78753 ttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCA 78812 || || || | ||||||||| || || || || || | || || || | ||| ||||| Sbjct 4027377 TTCTTGGTCTGCTTGTGTAGGTTGGAGACGGCGATACGAGCGGCGAGGACAGCGTAATCC 4027436 Query 78813 GGATG 78817 || || Sbjct 4027437 GGGTG 4027441 >seq2 Length=6009755 Score = 93.3 bits (102), Expect = 6e-14 Identities = 185/272 (68%), Gaps = 4/272 (1%) Strand=Plus/Minus Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 ||||||||||| || || || ||||| || || || || |||| ||||| | ||| Sbjct 3197010 TCGGAGTGAATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCTTCAGGAATC 3196951 Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557 || || || || || || ||| |||| |||||||| || || |||||| |||||| Sbjct 3196950 TGAACTTCACCACTGAAACGCTCAACCAAGTTCTCATTGACGATACCATCAGAGGCAGCA 3196891 Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAG 48614 || || || | || || ||||| || ||| | | ||| | || |||||| Sbjct 3196890 AAGAAGGCGAGGACGTGCGAGATAAAGTAGCGTTCATCGTCGTTCAGACGGTTGTTCCAG 3196831 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 || | | |||||| || | ||| | ||||| || ||||| || || || || || || Sbjct 3196830 TCGTGCAAATCTTTCGAGAGATCGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTTC 3196771 Query 48675 TTATACATATTCCATATATCACTGTATTGGAT 48706 || ||||| | ||| || | | |||| |||| Sbjct 3196770 TTGTACATTTGCCAGATCTGA-TGTAGAGGAT 3196740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668721849760