Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq6 114 3e-20 seq4 100 7e-16 >seq6 Length=3820271 Score = 114 bits (126), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| |||||||| || ||||| ||||||||||| |||| | || | || || Sbjct 3142583 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCC 3142524 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || |||||||| | | ||||||||| | | ||| || ||||| | Sbjct 3142523 TCGAGCTGCTTT--CCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTAT 3142466 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | ||||| || ||||| | || | | |||| || ||| || ||||| || || | Sbjct 3142465 CCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGG 3142406 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || |||||||| || |||| ||||| Sbjct 3142405 TCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| ||||| || ||||| || || ||||| |||||||| |||| | ||| | Sbjct 3142818 GAGACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTACG 3142759 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || || ||||| || | | ||||||||| | | || ||||| Sbjct 3142758 GCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTC 3142699 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || ||||| ||||| ||||| | || | | ||||||| || ||||| | || Sbjct 3142698 TTTGTCTTGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGT 3142639 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||||||||| ||||||| ||||| Sbjct 3142638 GATCGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||||| || ||||| || |||||||||||||| | | ||| | Sbjct 3143046 GAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCG 3142987 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||||||||| || || || || || | | ||||||||| | | ||| || || Sbjct 3142986 ACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTC 3142927 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| ||||| || ||| | || | | ||||||| || ||||| | || Sbjct 3142926 CTTATCTTGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGT 3142867 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || | ||||| ||||| | |||||| Sbjct 3142866 GATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828 >seq4 Length=4274674 Score = 100 bits (110), Expect = 7e-16 Identities = 132/181 (73%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974 || ||||||||||| |||| | ||| | |||||||| || ||||| ||||| |||| Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTT--CCGGCAAAGA 2700818 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | || | ||||||||| | | ||| || ||||| || || || || |||||| | | Sbjct 2700819 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2700878 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | |||| || ||| || || || || || || ||||||||||| ||||| |||| Sbjct 2700879 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 2700938 Query 152095 A 152095 | Sbjct 2700939 A 2700939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820666950039