Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq6 181 2e-40
seq4 143 6e-29
seq1 105 1e-17
seq2 96.9 7e-15
>seq6
Length=3820271
Score = 181 bits (200), Expect = 2e-40
Identities = 177/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || ||||| || |||| ||| ||| ||||| ||||||||||| |
Sbjct 3142827 ACCACCTCGGAGACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGA 3142768
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || |||||||| || ||||| || || || || ||||| || || |||||| ||
Sbjct 3142767 AAGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGG 3142708
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || || ||||||||||| || | || ||| ||||||| ||||| || | ||||||
Sbjct 3142707 AATGCCTTCTTTGTCTTGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTCGAC 3142648
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | ||||||||||| || || | |||||||||||| || |||||
Sbjct 3142647 TTCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600
Score = 165 bits (182), Expect = 2e-35
Identities = 175/228 (77%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || || |||| || | ||| || || ||||||||||| |||| |
Sbjct 3143054 CCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAA 3142995
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| ||||| |||||||| || || ||||| ||||| || || ||||| ||
Sbjct 3142994 AGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGG 3142935
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||| |||||||| |||||| || || | || || ||||| || | ||||||
Sbjct 3142934 ATACCCTCCTTATCTTGGAT-TTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGAC 3142876
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | ||||| ||||| || ||||| ||||| ||||| ||||||||
Sbjct 3142875 TTCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| || || || | ||| |||||| |||||||||||||| |
Sbjct 3142599 ACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGA 3142540
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| ||||| || || || || || ||||||||||| || |||||| ||
Sbjct 3142539 GAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGG 3142480
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||| || || ||||| | || ||| | ||||| ||||| || | || ||
Sbjct 3142479 GATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCAC 3142420
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || || | |||||| || || || |||||
Sbjct 3142419 CTCAAGGGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372
Score = 145 bits (160), Expect = 2e-29
Identities = 143/185 (77%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974
|| ||||||||||||| ||| ||||| || || || || || || || ||||||||||||
Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212
Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034
|| || |||||| ||||| ||||||||||| || ||||| | || ||| | |||||
Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 3142152
Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094
|| || |||| || || || || ||||| ||||| || || | ||||| ||||| |||
Sbjct 3142151 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 3142092
Query 283095 TGCAT 283099
|||||
Sbjct 3142091 TGCAT 3142087
>seq4
Length=4274674
Score = 143 bits (158), Expect = 6e-29
Identities = 139/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | || ||||| ||||| || || || || ||||||||||||
Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATC 2700820
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| || ||||| || |||||||||||||| |||||||| | || || | |||
Sbjct 2700821 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2700880
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| || | ||||| ||||| ||||| ||||| ||||| | ||||| |||||
Sbjct 2700881 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 2700939
>seq1
Length=7684667
Score = 105 bits (116), Expect = 1e-17
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || |||| || | ||| || || |||||||||||||| |
Sbjct 2663215 ACCACCACGGAGGCGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 2663274
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| || || || || || ||||| ||||||||||| || ||||| ||
Sbjct 2663275 GAGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGG 2663334
Query 282992 AATACCCTCCTTGTCT 283007
|||||||||||||||
Sbjct 2663335 GATACCCTCCTTGTCT 2663350
>seq2
Length=6009755
Score = 96.9 bits (106), Expect = 7e-15
Identities = 161/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 230178 GTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAAT 230237
||||| | |||| | || ||| | ||||||| |||| ||| | | |||| |||||
Sbjct 3197423 GTTGCCATTGAACAAGAATTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAAC 3197482
Query 230238 GCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGG 230297
| | | ||| | || || ||||| ||||| ||||| ||| | || || || || ||
Sbjct 3197483 TCGAAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTGCTCTTGGC 3197542
Query 230298 TACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAG 230357
|| |||| || ||| ||| |||||||| | || |||||| ||| || ||
Sbjct 3197543 AACAAGAAGTACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTGCC 3197602
Query 230358 GGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
|| || || ||||||||||| |||||||| | || ||||| | | | |||||
Sbjct 3197603 GGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTATCAGAAGGCTGGTGT 3197655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739079297886
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |