Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq6 168 2e-36 seq4 149 2e-30 >seq6 Length=3820271 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || |||||||| ||||| |||||||| | || || ||| ||||||| Sbjct 3142603 CAAATCTTCGTTAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCAGAC 3142662 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| || || || ||||||||||| || ||||| |||||||| Sbjct 3142663 ACCATCGATAACGTCAAGTCCAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCAGCAG 3142722 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || ||||| || || || || |||||||| | |||||| |||| || ||| | Sbjct 3142723 CGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAACATT 3142782 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||| || || || ||||| Sbjct 3142783 CAAAAGGAATCCACTCTACACCTTGT 3142808 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||||| || || || || |||||||| |||||||| ||| ||| Sbjct 3142375 CAAATCTTTGTCAAGACTCTTACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTCTGAC 3142434 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||||||||| || || || |||||||| |||||||| Sbjct 3142435 ACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAGCAG 3142494 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| ||||| |||||||| || || | || || |||| || ||| || Sbjct 3142495 CGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAACATC 3142554 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || |||||||| || || || ||||| Sbjct 3142555 CAGAAAGAATCCACTCTTCACCTTGT 3142580 Score = 125 bits (138), Expect = 2e-23 Identities = 134/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || |||||||| |||||||| || || Sbjct 3142090 CAGATCTTCGTCAAGACCCTCACTGGGAAGACCATCACCCTTGAGGTGGAGTCTTCTGAT 3142149 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||||| || || || ||||| |||||||| Sbjct 3142150 ACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAG 3142209 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || | ||||| || || || ||||||||||| || | || ||| | || || ||| Sbjct 3142210 CGTTTGATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTTTCTGACTACAAC 3142266 Score = 105 bits (116), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | || ||||| || ||||| | || || ||| |||||| Sbjct 3142831 CAGATTTTCGTCAAGACCTTGACCGGAAAGACTATCACATTGGAAGTCGAATCGTCAGAC 3142890 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || || || || || || || || ||||| || |||||||| Sbjct 3142891 ACCATTGACAATGTGAAGAGCAAAATCCAAGATAAGGAGGGTATCCCACCCGACCAGCAG 3142950 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || || || || || || || |||||||| | |||||| | ||||| ||| || Sbjct 3142951 CGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTCGCACTCTTTCTGATTACAACATC 3143010 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 3143011 CAGAAGGAGTCCACCCTTCA-CTTG 3143034 >seq4 Length=4274674 Score = 149 bits (164), Expect = 2e-30 Identities = 141/180 (78%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 |||||| || || ||||| || || || |||||||||||||| || ||| |||||||| Sbjct 2700940 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCAT 2700881 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| || || ||||| || |||||||| || || Sbjct 2700880 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 2700821 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| |||||||| ||||| |||||||| | ||||| |||| || ||| |||| || Sbjct 2700820 GATCTTTGCCGGAAAGCAGCTTGAAGATGGTCGCACTCTCTCCGACTACAACATCCAGAA 2700761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731061194746