Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20purpureogenus_20[genbank_20GCA_5F001270325.1_202015- 08-19] 1,010 sequences; 38,853,631 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq19 102 6e-17 seq66 93.3 3e-14 >seq19 Length=931127 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || |||||||| ||||||||||| ||| ||| |||| || Sbjct 687252 ACCAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGCCCGTCCTCA 687193 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| |||| ||||||||||| || || | ||||||||||| Sbjct 687192 AGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 687133 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | || | | ||| ||||||| ||| || |||||| Sbjct 687132 ATCTTAGACTTGACGTTGTCGATGGTATCGCTAGACTCGACCTCCAGGGTGATTGTCTTG 687073 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| |||||| || ||||| ||||| Sbjct 687072 CCGGTCAAAGTCTTAACGAAGATCTGCAT 687044 Score = 100 bits (110), Expect = 2e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||||||||||||||| || |||| | || ||| Sbjct 686475 ACCAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCATCCTCC 686416 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| ||||| ||||| | |||||||||||| | Sbjct 686415 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGA 686356 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||||||||| | ||| || |||||| Sbjct 686355 ATCTTGGACTTGACATTATCGATGGTGTCGCTGGACTCCACCTCAAGGGTGATAGTCTTG 686296 Query 45308 CCCGT 45312 || || Sbjct 686295 CCGGT 686291 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| ||||| || |||||||||||| || ||| | || ||| Sbjct 686796 ACCAAGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGGCCATCCTCC 686737 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||||| ||||| || || | ||||||||| ||| Sbjct 686736 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGG 686677 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||| | ||| || |||||| Sbjct 686676 ATCTTCGACTTGACATTATCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTG 686617 Query 45308 CCCGTCAGAGTCTTCAC 45324 || ||||| ||||| || Sbjct 686616 CCAGTCAGGGTCTTGAC 686600 >seq66 Length=1780356 Score = 93.3 bits (102), Expect = 3e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||| |||||||||||| |||| ||| | || || || || || |||||||| | Sbjct 1482119 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 1482178 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 ||| ||||| ||||| || || | |||||||||||| || || ||| || Sbjct 1482179 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 1482238 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | |||| | ||| || || | |||||| ||||| |||||||| ||||| || | Sbjct 1482239 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 1482298 Query 45327 A 45327 | Sbjct 1482299 A 1482299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395070336871210