Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20purpureogenus_20[genbank_20GCA_5F001270325.1_202015- 08-19] 1,010 sequences; 38,853,631 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5 149 9e-31 seq67 114 2e-20 >seq5 Length=1594474 Score = 149 bits (164), Expect = 9e-31 Identities = 553/853 (65%), Gaps = 14/853 (2%) Strand=Plus/Plus Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCA 79679 ||| |||| || || ||||| ||||||| || | || | | || |||||||| Sbjct 1234740 AGAAGCCAAGTTGCAGACGGCGACCTCATCAGGGGCGCTGTACTCGACAATCTCAGTGCA 1234799 Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739 ||||| | ||||| || | || | || || ||||| | || || ||||| Sbjct 1234800 CAGGTTGGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCCTATTGCAAGCATC 1234859 Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799 ||| || || ||||| || ||||||| || |||||| || | ||| || | ||| | Sbjct 1234860 CTTGTACAGCATGAAAGGGTTACCAGTCTCGGTCTGAGCCTCGAGAATAGCATACCACA- 1234918 Query 79800 GACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCTTTC--GTATTGTGTATATA 79855 | || ||||||| || || |||| | | ||| ||| ||| | ||| | Sbjct 1234919 GCTTCTGAGCCTTGAT---AGTCTTGCGGCCACGGCCCTCCTTCTCGTAGCGCTCATACA 1234975 Query 79856 -ATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATC 79914 | ||| |||||||||| || | |||||| | | || ||| |||| ||| || | | Sbjct 1234976 GAGCGT-CGAACTCGTCACCGTAGACATCGGCAAGACCGGGAGCCTCGTGAGGGCAGAAC 1235034 Query 79915 AACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 79974 | | ||| || || | ||| || || ||||| |||||||| || |||| || || Sbjct 1235035 AGGGTCCATTCACCGTTGGCCTCGACACGCTTCATGAAGAGATCGGGGGTCCACAGGGC- 1235093 Query 79975 ATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 80033 ||| || ||||| | || | ||||| || || ||||| ||||||||||| Sbjct 1235094 ATAGAACAGATCACGGGCACGGACTTCCTCCTTACCGTGGTTCTTGCGGAGATCGAGGAA 1235153 Query 80034 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTT 80093 | | | | ||| | ||||| || |||| ||| ||||| | | | || || || ||||| Sbjct 1235154 CTCGAAGACATCCGCGTGCCAGGGCTCCAGGTAGATGGCAAAAGCACCGGGACGCTTGTT 1235213 Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153 || ||||| || | ||| | || ||||| || || || | | ||| || | ||||| Sbjct 1235214 ACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTAGACCCGGAGCATGGGGACGATACC 1235273 Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213 ||||| | || || || || | || ||| | ||||||||||| || Sbjct 1235274 GTTGGAGGAGCCGTTAGTTCCAGCAATGTAGGAATTAGTGGCACGAATACGGTGAACGTT 1235333 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 ||||| || || || || | || ||||| | || || || | || |||||||| Sbjct 1235334 CAGACCGATACCACCAGCAGTCTTGGAGATCATGGCACAAGTCTTGAGTGTGTCATAGAT 1235393 Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 80333 ||||| ||||| || || |||| | || || || || | || ||| | | Sbjct 1235394 ACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAGGCCAGCTGGGGCTGCGG 1235453 Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 || | || || || | ||||| |||||||| || || | || | ||||| | || Sbjct 1235454 GGTGGCGGCGTTGAACAGAGTAGGGGAAGCGTGAGTGAAGTACTTCTGAGACATCAAGTT 1235513 Query 80394 GTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGACACGCATTA 80452 ||| ||||| || || ||| || || || | ||||| || || || |||||||| | Sbjct 1235514 GTAGGTCTCGATGGCCTTTTCAATGTCATCACCG-TGAATACCCACAGCAACACGCATCA 1235572 Query 80453 ACATGTGCTGAGG 80465 || ||||||||| Sbjct 1235573 GCAGGTGCTGAGG 1235585 >seq67 Length=2947605 Score = 114 bits (126), Expect = 2e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || || || || ||||||||||||||| | || || |||||||| Sbjct 1705644 AACAGCAGGCAGGCAAAGTCAGTGTGCAGACCCTCGTCACGGGAGATCAGCTCGTTGGAG 1705585 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || |||||||| || |||||||| || ||||| || ||||| || || || ||| Sbjct 1705584 AAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCA 1705525 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 || |||||||| || || || || ||||||||||| || Sbjct 1705524 GAGAAGAAGATACCCTCAACGGCAGCAAAGGCAACCAG 1705487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718259731856400