Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20purpureogenus_20[genbank_20GCA_5F001270325.1_202015- 08-19] 1,010 sequences; 38,853,631 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq67 167 3e-36 seq5 163 4e-35 seq12 91.5 2e-13 >seq67 Length=2947605 Score = 167 bits (184), Expect = 3e-36 Identities = 336/493 (68%), Gaps = 23/493 (5%) Strand=Plus/Plus Query 125370 AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG 125429 ||||| | |||| || ||||||||| ||| |||| | | ||| | | ||| Sbjct 1705430 AAGGCCGAGTGGGCTATGCGGTGGATCTCGGACCGTGAGTCCACCTTTGCCCAGCGCCTG 1705489 Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 || || || || ||||| ||||| |||||||| || || || || ||||||| ||| Sbjct 1705490 GTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTCCATCTTCTGG 1705549 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 ||||||||||| || ||||||||||| ||||| | |||||| | || || || ||| Sbjct 1705550 CTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTGATCTCCCGTGAC 1705609 Query 125550 GAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCGAG- 125606 ||||| || ||| |||||||||| || ||||| || || || | | | ||| || Sbjct 1705610 GAGGGTCTGCACACTGACTTTGCCTGCCTGCTGTTCTCTCACCTGAACAACCGCCCCAGC 1705669 Query 125607 -TGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACA 125665 |||| | | ||| | || |||||| ||| || || | || || || Sbjct 1705670 AAGCAGGT----TGTTGAGGATGT------CATTGT---CGAGGCTGTCGGTATCGAGCA 1705716 Query 125666 AGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTG 125725 ||||| || || || | || || | | | | |||||||||| |||||| ||||| Sbjct 1705717 GGAGTTCCTCACTGACGCTCTGCCCTGCGCCCTCCTCGGCATGAACTCCAAGCTGATGTG 1705776 Query 125726 CGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---T 125782 | ||||||| ||||| || || || ||||| ||| || | ||| ||||| Sbjct 1705777 CCAGTACATCGAGTTCGTCGCTGACCGTCTTCTGGTCG---CTCTCGGCAACAAGAAGTA 1705833 Query 125783 TTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAA 125842 |||||||||| || ||||| ||||||||| ||| || || | || |||||||| Sbjct 1705834 CTACAACGCCACCAACCCCTTCGATTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAA 1705893 Query 125843 CTTTTTCGAGAAG 125855 ||| ||||||||| Sbjct 1705894 CTTCTTCGAGAAG 1705906 Score = 149 bits (164), Expect = 9e-31 Identities = 209/292 (72%), Gaps = 10/292 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| |||||| ||||||| || ||||| | ||| ||| | |||||| Sbjct 1705021 ATCTGGCAAATGTACAAGAAGGCTGAGGCCTCTTTCTGGACCGCCGAGGAGATTGATCTG 1705080 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| ||| |||| ||| | | || ||| || ||||| | || || || Sbjct 1705081 TCCAAGGATCTGCACGACTGGCACAACCGCCTGAACGATGACGAGCGTTACTTCATCTCC 1705140 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| || |||||||||| |||| |||||| || || |||||||| || ||| || || Sbjct 1705141 CACGTTCTGGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTGCTGGAGCGT 1705200 Query 125199 TTCTCTCAAGAGTTGA---CCA--TTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCA 125253 ||| || | ||| || | || |||| ||||| ||||| ||||| |||| Sbjct 1705201 TTC-----AGCGGTGAAGTTCAGGTCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCA 1705255 Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 |||| |||||| | ||||| || | |||||| || ||||| | ||||| Sbjct 1705256 TGATGGAGAACATCCACTCCGAGACCTACTCTCTTCTCATTGATACCTACAT 1705307 >seq5 Length=1594474 Score = 163 bits (180), Expect = 4e-35 Identities = 450/670 (67%), Gaps = 20/670 (3%) Strand=Plus/Minus Query 96660 GCCTCTTGCTATCTGCTCGAACTCAAAGAGGACAGCATCGGTGGCGT-TATGGACACGCT 96718 |||||||||| ||| | || | || ||||||||||| | || | |||| |||| || Sbjct 1235438 GCCTCTTGCTTCCTGGTTGATATGAAGGAGGACAGCATTGAGGGTATCTATG-ACACACT 1235380 Query 96719 AAAGGACGCG-GCCACCATTTCAAAACACTG-TGGCGGTGTAGGTTTGCATGTGCACAAG 96776 ||| || | |||| || || || |||| ||| ||| | ||| || | || ||| Sbjct 1235379 CAAG-ACTTGTGCCATGATCTCCAAG-ACTGCTGGTGGTATCGGTCTGAACGTTCACCGT 1235322 Query 96777 TTGCGCTGTAAAAACTC-TACGATTCATTCAACAAACGGCAACGCCAGTGGCCTAGTGCC 96835 | || | || || ||| ||| | ||| |||||| | ||| || | || || Sbjct 1235321 ATTCGTGCCACTAATTCCTAC-ATTGCTGGAACTAACGGCTCCTCCAACGGTATCGTCCC 1235263 Query 96836 AATGCTCAGAATGTACAATG-CAATGTCACGATACGTTACACAGGGCGGCAATAAACGGC 96894 |||||| | | ||||| || || | || |||||| ||||| || || || || | Sbjct 1235262 CATGCTCCGGGTCTACAACAACACTGCC-CGCTACGTTGACCAGGGTGGTAACAAGCGTC 1235204 Query 96895 CAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAGA 96954 | || ||| | ||| ||||| |||| || ||||||||||| || || || || |||| Sbjct 1235203 CCGGTGCTTTTGCCATCTACCTGGAGCCCTGGCACGCGGATGTCTTCGAGTTCCTCGATC 1235144 Query 96955 TGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGGG 97014 | ||||| ||| || || || | || ||| | || |||| ||||| || ||| Sbjct 1235143 TCCGCAAGAACCACGGTAAGGAGGAAGTCCGTGCCCGTGATCTGTTCTATGCCCTGTGGA 1235084 Query 97015 TGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGCTACTGGAGCCTAATGTGCC 97071 || ||| | ||||||||||| ||| | | |||||| | |||| ||| | |||| Sbjct 1235083 CCCCCGATCTCTTCATGAAGCGTGTCGAGGCCAACGGTG---AATGGACCCTGTTCTGCC 1235027 Query 97072 CCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGG 97131 | || | | |||||||| ||||| || || || ||||| || || ||| | Sbjct 1235026 CTCACGAGGCTCCCGGTCTTGCCGATGTCTACGGTGACGAGTTCGACGCTCTGTATGAGC 1234967 Query 97132 CCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACGAGAA-CTGTGGAAGGC 97189 ||||||| | |||||||| || |||| | || | || | |||| |||||| | || Sbjct 1234966 GCTACGAGAAGGAGGGCCGTGGCCGCAAGACTA-TCAAGGCTC-AGAAGCTGTGGTATGC 1234909 Query 97190 CATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAA 97249 || | ||||||| |||||||| | || | ||| || ||||||||| | || Sbjct 1234908 TATTCTCGAGGCTCAGACCGAGACTGGTAACCCTTTCATGCTGTACAAGGATGCTTGCAA 1234849 Query 97250 TCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAAT 97309 | | || |||||||| || |||| |||||| ||||||| |||||||| || || Sbjct 1234848 TAGGAAGAGCAACCAGAAGAACCTGGGTACCATCCGCAGCTCCAACCTGTGCACTGAGAT 1234789 Query 97310 TGTAGAGTAC 97319 ||| |||||| Sbjct 1234788 TGTCGAGTAC 1234779 >seq12 Length=511337 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 70062 AAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATG 70121 |||| |||||||| || || || || || ||||| ||| | |||| || | |||| | Sbjct 64577 AAGAAGGCGATCTAGGACCCGTCTATGGCTTCCAATGGCGACACTTTGGAGCGGAGTACG 64518 Query 70122 TAGACTGCGA-GACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGAC 70180 | || ||||| | | |||||| ||||||||||||| |||||| | || | || || Sbjct 64517 TCGA-TGCGAAGGCGGACTATACGGGTCAGGGTGTGGATCAACTTAAGGATGTTGTTAAC 64459 Query 70181 ACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGAT 70240 | | | || || ||| ||| | | ||| | ||| | | |||||||||||||| Sbjct 64458 AAGATTATGAACACTCCTTTTGATCGTCGTATCATCATGAGTGCTTGGAATCCTGCAGAC 64399 Query 70241 TTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTA 70287 ||| | | |||||||| || || || ||| || |||||||| || Sbjct 64398 CTGCGCAAGATGGCACTCCCGCCCTGCCACATGTTCGCTCAGTTCTA 64352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741049844127600