Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20purpureogenus_20[genbank_20GCA_5F001270325.1_202015- 08-19] 1,010 sequences; 38,853,631 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq66 141 1e-28 seq19 118 1e-21 seq71 98.7 1e-15 >seq66 Length=1780356 Score = 141 bits (156), Expect = 1e-28 Identities = 142/182 (78%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| |||||||| | || |||||||||||||||||||| | Sbjct 1482119 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 1482178 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | || |||||||||| |||||| |||||| ||| | Sbjct 1482179 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 1482237 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | || ||||| || |||||||| || || || Sbjct 1482238 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 1482297 Query 46583 AA 46584 || Sbjct 1482298 AA 1482299 >seq19 Length=931127 Score = 118 bits (130), Expect = 1e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| || | ||| ||||| || || ||||||||||| || ||||| | || || Sbjct 686475 ACCAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCATCCTCC 686416 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||||||||| |||| |||||||||||| | || | || |||||||||| Sbjct 686415 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGA 686356 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||||| | | | |||||||| || ||||| || | ||||| || ||| Sbjct 686355 ATCTTGGACTTGACATTATCGATGGTGTCGCTGGACTCCACCTCAAGGGTGATAGTCTTG 686296 Query 46565 CCCGT 46569 || || Sbjct 686295 CCGGT 686291 Score = 111 bits (122), Expect = 2e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||||||||| | ||||| | || || ||||||||||| || || Sbjct 686778 TCCTTTTGGATGTTGTAGTCGGACAAGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAG 686719 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| |||||||||||| | || | | |||||| ||| ||||||| ||||| | Sbjct 686718 ATCAGGCGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGGATCTTCGACTTGACATTA 686659 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || || || || | |||||||| ||||| ||||| || || || Sbjct 686658 TCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTGAC 686600 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || ||||| ||||| |||| ||||||||||||||||| || Sbjct 687007 CTCCTTCTGGATGTTGTAATCAGATAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAA 686948 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||| ||||| | || | || |||||| || |||||| |||| | ||| Sbjct 686947 AATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTATCTTGGATCTTGCTCTTCA-CGT 686889 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| || || || |||| |||||||| ||||| || || || || | Sbjct 686888 TGTCGATGGTATCGGAGGACTCGACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGA 686829 Query 46581 CAAAGATTTGCAT 46593 | || || ||||| Sbjct 686828 CGAAAATCTGCAT 686816 >seq71 Length=1553983 Score = 98.7 bits (108), Expect = 1e-15 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || |||||||| | || |||||||||||||||||||| Sbjct 78290 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 78349 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| ||||||||||| | || | | ||||||||| Sbjct 78350 GATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTC 78388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565231263865200