Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20purpureogenus_20[genbank_20GCA_5F001270325.1_202015- 08-19] 1,010 sequences; 38,853,631 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq67 156 8e-33 seq5 100 5e-16 >seq67 Length=2947605 Score = 156 bits (172), Expect = 8e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTAC 25868 ||| | |||||| | ||||| |||||| ||| ||||||| | | | | | | | || Sbjct 1705415 CCCTGTATCAAGCGCAAGGCCGAGTGGGCTATGCGGTGGATCT-CGGACCGTGAGTCCAC 1705473 Query 25869 GTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT 25928 |||| | |||| ||||| ||||||||||| || ||||| ||||| ||| || ||||| Sbjct 1705474 CTTTGCCCAGCGCCTGGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCGTT 1705533 Query 25929 TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGA 25988 || ||||||||||||||||| || || ||||||||| ||| ||| |||||||| Sbjct 1705534 CGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGA 1705593 Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036 ||| ||| | | ||||||||||| |||| || |||||||||||||| Sbjct 1705594 GCTGATCTCCCGTGACGAGGGTCTGCACACTGACTTTGCCTGCCTGCT 1705641 Score = 125 bits (138), Expect = 1e-23 Identities = 169/234 (72%), Gaps = 5/234 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||||||||||||| | ||| |||||||||||| |||||||||||| Sbjct 1705021 ATCTGGCAAATGTACAAGAAGGCTGAGGCCTCTTTCTGGACCGCCGAGGAGATTGATCTG 1705080 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| || ||| |||| || || || | | ||||||| | || || Sbjct 1705081 TCCAAGGATCTGCACGACTGGCACAACCGC-CTGAACGATGACGAGCGTTACTTCATCTC 1705139 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 |||| |||| ||||| || ||||| || ||||| || |||||||| ||| ||| | Sbjct 1705140 CCACGTTCTGGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTGCTGGAGCG 1705199 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | | ||||| ||| | |||||| || ||||||||||||||||| Sbjct 1705200 TTTCAGCGGTGAAGTTCAGGTCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGAT 1705253 >seq5 Length=1594474 Score = 100 bits (110), Expect = 5e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| ||||| ||||| || || | || || | | ||| | ||| || ||| | || Sbjct 1234167 GTTGACCACCTGGAACTCACCAGCCAGGACACGGCGGGAGTAGATGTTGGAGGTGTAAGG 1234226 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||||||| |||||||||||| | || ||||| ||||||||||| ||||| Sbjct 1234227 CTCGAAGCACTCGTTGAAGCCCAGGATCTGGGAGGTACTGGCAGTGGGCATGGGAGCCAC 1234286 Query 221236 CAGCAGACTGTTGCGCAGTCCGA 221258 ||||||||||||||| | |||| Sbjct 1234287 CAGCAGACTGTTGCGAACACCGA 1234309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928833073334400