Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq446 100 3e-16 seq46 84.2 3e-11 >seq446 Length=229981 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| ||||| || | ||||| || | || || || |||||||||||||| Sbjct 154627 TCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCAAGTTGCTTACCAGCGAAA 154568 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || | |||||||||||||| || | || || |||| | ||| |||| | |||| | Sbjct 154567 ATCAATCGCTGCTGGTCGGGAGGAATGCCTTCTTTGT-CTTGAATTTTCGACTTGACGTT 154509 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| ||||| || || | |||||| || || || || || ||||| || Sbjct 154508 ATCAATGGTGTCTGATGATTCGACTTCCAACGTGATCGTCTTTCCAGTGAGAGTCTTGAC 154449 Query 43172 AAAGATTTGCAT 43183 || |||||||| Sbjct 154448 GAAAATTTGCAT 154437 Score = 93.3 bits (102), Expect = 5e-14 Identities = 136/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 42999 TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGT 43058 ||||| ||||| |||| || || || |||| || ||||| || |||||||| || | Sbjct 154110 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGTTTTCCAGCGAAGATCAAA 154051 Query 43059 CGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCA 43116 ||||||||||| | || | || |||||||||| ||| | || | |||| ||| | | | Sbjct 154050 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC-TGAATCTTGGACTTGA-CGTTGTCGA 153993 Query 43117 CCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGA 43176 || || || ||||| || | |||||||| || || || || ||||| ||||||| Sbjct 153992 TGGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTACCAGTAAGGGTCTTGACAAAGA 153933 Query 43177 TTTGCAT 43183 | ||||| Sbjct 153932 TCTGCAT 153926 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | ||| |||||| || || |||||||||| ||||| || | Sbjct 154880 ACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACC 154821 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || || ||||||||||| || || | |||||||||||||| || | | |||||| Sbjct 154820 ATCTTCCAGTTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTT 154761 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 || |||||| || | | | | || || ||||| || || | ||||| Sbjct 154760 ATCTTGGATTTTGCTCTTCACATTGTCAATGGTATCTGATGATTCGACTTCCAATGTGAT 154701 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || ||||| | ||||| || || || ||||| Sbjct 154700 AGTCTTTCCCGTCAAGGTCTTGACGAAAATCTGCAT 154665 >seq46 Length=531280 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || | ||||| || | || || |||||||| || || || | Sbjct 30388 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGA 30329 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||||| || | | |||||||||| ||| || |||| | Sbjct 30328 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 30269 Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173 | | |||||| || || || |||| |||||||| || ||||| || ||||| || | Sbjct 30268 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGA 30209 Query 43174 A 43174 | Sbjct 30208 A 30208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571813740231200