Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq379 122 2e-22 seq492 109 1e-18 seq530 93.3 8e-14 >seq379 Length=249056 Score = 122 bits (134), Expect = 2e-22 Identities = 290/434 (67%), Gaps = 27/434 (6%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| || || ||||| ||||| || |||||||| ||| | || || || || |||| Sbjct 108112 TTGTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTATCTTCT 108053 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || | ||||| | ||| | ||||||| | |||| |||||| ||| | || ||| | | Sbjct 108052 GGTTGAAGAAGCGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCTCTCGTG 107993 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 |||| |||||||| ||||||||| ||| |||| || | | | | || Sbjct 107992 ACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCTCCCACC------TCAACAACC 107939 Query 102096 CATCAAGAGAAAGGATTCTTGAA------ATTGTCACTGAAGCCGTCCGAATTGAACAAG 102149 | || | | || ||||| ||||| ||| ||||| |||||||||| Sbjct 107938 GTCCTAGCCCCAAGGTTATTGAAGACATCATTGT---TGACGCCGTTGCCATTGAACAAG 107882 Query 102150 AATTTCTCACAGT-----TTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGAT 102204 | || | || | |||||||| | | || | |||||||||| |||||||| Sbjct 107881 AGTTCTTGACCGACGCTCTTCCCTGC--GCT---TTGCTCGGAATGAACTCGAAGTTGAT 107827 Query 102205 GAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAA-AAGC 102263 | ||||||||||||| || || || || || ||||||| | || | | || ||| Sbjct 107826 GTGCCAGTACATTGAGTTCGTTGCTGACCGTCTCTTGGTTGCTCTTGG-CAACAAGAAGT 107768 Query 102264 ACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCA 102323 |||| |||| ||||||||||| |||||||| || || || || | ||||||| Sbjct 107767 ACTACAATGCCACCAACCCCTTTGATTTCATGGAGAACATCTCTCTTGCCGGAAAGACCA 107708 Query 102324 ACTTTTTTGAAAAG 102337 |||| || || ||| Sbjct 107707 ACTTCTTCGAGAAG 107694 >seq492 Length=205486 Score = 109 bits (120), Expect = 1e-18 Identities = 173/248 (70%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || || |||| ||||||||| || || ||| ||||||||||| |||||||||||| Sbjct 125351 CCACCGGCAGACTTGGAGATCATAGCACATGTCTTGAGAGTATCATAGATACCCTCAATG 125292 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 || || || | | | ||| ||||||||| || | ||| || ||| || || Sbjct 125291 CTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCGAGGAGTACCTGCG 125232 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || |||| ||||| || || || || || || | | ||||| | || ||||| ||| Sbjct 125231 TTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGAGACATCAAATTGTATGTCTCA 125172 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 ||| | | ||||| |||||||| |||||||| |||||||| ||||||| || Sbjct 125171 ATGGCTTTCTCGATGTTCTCGCCGTGAATACCGACAGCAACACGCATGATCATGTGTTGG 125112 Query 95032 GGGCGCTC 95039 || || || Sbjct 125111 GGACGTTC 125104 >seq530 Length=693263 Score = 93.3 bits (102), Expect = 8e-14 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 35403 TGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTG-TTCT 35461 |||| ||||| ||||| ||||||||||| ||||| ||||| |||||| | | || Sbjct 527965 TGGGCCCCGTCTACGGTTTCCAATGGCGCCATTTCGGTGCGGAATAT-AAAGATGCAAAA 528023 Query 35462 TCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAA 35521 |||||||||| ||| |||| | ||||| | ||| |||| || | | || | | Sbjct 528024 GCCGATTATACGGGAGAGGGCGTCGATCAGATTGCCGATATCATACACAAATTGCGCACA 528083 Query 35522 AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATG 35581 ||||| |||| | | |||||| | ||||| ||||| || | |||| | | | ||| Sbjct 528084 AATCCGTATGACCGTCGAATGATTCTTACGGCGTGGAACCCGAAGGATTTGAAGTTGATG 528143 Query 35582 GCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 | ||| || || || || ||| ||| || |||||||| Sbjct 528144 GTTCTACCGCCTTGTCATATGTTTGCGCAGTTTTATGT 528181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989577153315700