Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq492 190 3e-43 >seq492 Length=205486 Score = 190 bits (210), Expect = 3e-43 Identities = 630/968 (65%), Gaps = 24/968 (2%) Strand=Plus/Minus Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002 |||| ||| |||| || || || || ||||||| | | | |||| || ||||| Sbjct 125960 GCAAGAGAAGCCAAGTTGCAGACAGCAACCTCATCGGGAGCACAGTATTCAATAATCTCT 125901 Query 63003 GTGCAAAGATTA---CTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA 63059 ||||| || || |||| |||||| || | || | ||| || ||||| ||||| Sbjct 125900 GTGCAGAGGTTGGAGCTACG---GATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTGTTG 125844 Query 63060 CACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCT 63119 || |||||||| || || ||||| || ||||||| ||| |||||| || | || || Sbjct 125843 CAAGCATCCTTGTAGAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCG 125784 Query 63120 TTCCAGACGACTC-GAGCCTTTATTATA----GATTTGTATCTCCTTTCTCTTTCGTATA 63174 | ||||| | || | ||||| | || || | || | |||| | | | | Sbjct 125783 TACCAGA-GCTTCTGGGCCTTGACAGTACGACGACCACGACCTTCCCTCTCATACTTCTC 125725 Query 63175 GAGTATACA-ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCC 63233 | |||| | ||| | ||||| || || | || | | | | | | | || | Sbjct 125724 G----TACAGAGCGT-CAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTA 125670 Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 ||||| | ||| | ||| || || ||| || || ||| ||||||||||| || Sbjct 125669 GGACAGAACAAGGTCCAGTCCTGGTTGGCCTCTACACGACGCATGAAGAGATCAGGGGTC 125610 Query 63294 CAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63352 || || || ||| || ||||| | | | ||| || || || ||||| ||| Sbjct 125609 CACAGGGC-ATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCGTGGTTCTTGCGAAG 125551 Query 63353 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63412 || |||||| | | || ||| || |||||||| || | ||| || || | | ||||| Sbjct 125550 GTCAAGGAACTCAAAAACATCCGAGTGCCACGGCTCGAGGTAGATAGCAAACGCACCAGG 125491 Query 63413 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63472 || ||||| ||||| || || | |||||| |||||||| || | ||||| | ||| || Sbjct 125490 GCGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGG 125431 Query 63473 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--A 63530 | || ||||||||| |||||||||| || ||| ||| ||| | | ||| || Sbjct 125430 CACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAGCCAGTAGAACGGATGCG 125371 Query 63531 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 63590 | |||| ||||| || || || || || ||||| | || ||| || | Sbjct 125370 GTGGACATTG--AGACCAATACCACCGGCAGACTTGGAGATCATAGCACATGTCTTGAGA 125313 Query 63591 GTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63650 || |||||||| || || ||||| || || |||||| | || || || || | Sbjct 125312 GTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGC 125253 Query 63651 TGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63710 || | |||| ||| || || || || || || ||||| ||||| || || |||| | | Sbjct 125252 TGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGA 125193 Query 63711 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 63770 || | | |||||| |||||||| ||| || || | | ||||| || || || Sbjct 125192 GACATCAAATTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCGACAGCA 125133 Query 63771 ACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAG 63830 |||||||| | |||||| || || | ||| ||| ||| || ||| | | | |||| Sbjct 125132 ACACGCATGATCATGTGTTGGGGACGTTCGGCAACCTTGCCATTGATTCTGAGGAGGTAG 125073 Query 63831 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 63890 || ||| | ||| || ||||| || || | || ||||| || || |||| ||| Sbjct 125072 GAGCGTTCGAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGTCACGGTCATAAACAATG 125013 Query 63891 ACCGAATT 63898 |||| || Sbjct 125012 GCCGAGTT 125005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629813348731200