Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq379 87.8 2e-12 >seq379 Length=249056 Score = 87.8 bits (96), Expect = 2e-12 Identities = 194/288 (67%), Gaps = 5/288 (2%) Strand=Plus/Plus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 ||||| || ||||| || | ||| | |||||||| ||||| ||||| |||||| Sbjct 108291 ATGTAGGTGTCAATGAGGAGAGAATATGTCTCAGAGTGAATGTTCTCCATCATAATCTGA 108350 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTC-CGAGTAAAATCTTTCGGCCAA 14260 |||||||| ||||||| |||||| | || ||||| | | | ||| | || |||| Sbjct 108351 AAACCATAGAAGCATCGAGCTTCGGGAATCTGAACTTCACCACTGAAA-CGCTCAACCAA 108409 Query 14261 ATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA 14320 || ||||| || |||||||| || ||||| || || | | || |||||||| Sbjct 108410 GTTCTCATTGACGATACCATCCGAGGCAGCAAAGAAGGCGAGGACGTGAGAGATAAAGTA 108469 Query 14321 TTGCTCTTCATTGTTGA---GTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTC 14377 | || || | ||||| | || ||||| ||| ||||| || || ||||| | || Sbjct 108470 ACGTTCATCGTCGTTGAGGCGGTTGTTCCAGTCGTGCAAATCTTTCGAGAGATCGATCTC 108529 Query 14378 ATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14425 || | ||||| || || | || || || |||||| ||| || Sbjct 108530 TTCGGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTACATTTGCCAAAT 108577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479724761836000