Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq379 107 2e-18 seq446 100 3e-16 >seq379 Length=249056 Score = 107 bits (118), Expect = 2e-18 Identities = 162/227 (71%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50691 || ||||| | ||| ||| ||||||| || || |||||| | ||| || ||| | || Sbjct 107903 GACGCCGTTGCCATTGAACAAGAGTTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGA 107844 Query 50692 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTT-GTTGCA 50750 |||||| | | |||||||| ||||||||||||| ||||| ||| | | || ||||| Sbjct 107843 ATGAACTCGAAGTTGATGTGCCAGTACATTGAGTTCGTTGCTGACCGTCTCTTGGTTGCT 107784 Query 50751 GCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATAT 50809 ||| |||| ||| ||||| ||||| ||||||||| || ||| | ||||| | Sbjct 107783 CTTGG--CAACAAGAAGTACTACAATGCCACCAACCCCTTTGATTTCATGGAGAACATCT 107726 Query 50810 CGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856 | | | || || || ||||| ||||| | ||||| || || ||| Sbjct 107725 CTCTTGCCGGAAAGACCAACTTCTTCGAGAAGCGTGTTGGTGATTAC 107679 >seq446 Length=229981 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||| ||||| |||||||| ||| | |||| ||||| ||||| |||||| Sbjct 154633 GTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCAAGTTGCTTACCA 154574 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || | |||| || ||||| |||||||| |||||||||||||| |||||| || Sbjct 154573 GCGAAAATCAATCGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCTTGAATTTTCGACTTG 154514 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | | ||| ||||| | || | |||||| || || | || Sbjct 154513 ACGTTATCAATGGTGTCTGATGATTCGACTTCCAACGTGATCGTCTTTCCAGTGAGAGTC 154454 Query 143168 TTTACGAATATTTGCATA 143185 || ||||| ||||||||| Sbjct 154453 TTGACGAAAATTTGCATA 154436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507010977652800