Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq446 141 2e-28 seq379 84.2 5e-11 >seq446 Length=229981 Score = 141 bits (156), Expect = 2e-28 Identities = 143/186 (77%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 104374 CTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAG 104433 |||||| || |||||||| || || | ||||||||| || ||||||||||| || || | Sbjct 154111 CTGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGTTTTCCAGCGAAGATCAA 154052 Query 104434 CCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTAC 104493 | ||| || |||||||| || || || || ||||||||||| | || || || || | Sbjct 154051 ACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGAT 153992 Query 104494 GGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATAT 104553 |||||| || || ||||| || || || |||||||||||||| || || ||||| || Sbjct 153991 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTACCAGTAAGGGTCTTGACAAAGAT 153932 Query 104554 CTGCAT 104559 |||||| Sbjct 153931 CTGCAT 153926 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||||||||| || || ||||| ||||| || | ||||| Sbjct 154421 AAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCGTC 154362 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || |||||||||||||| || | | ||| || |||||||| || || || || || Sbjct 154361 CTCGAGCTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTGTC 154302 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 || ||||| | || ||||| || | |||||| || || ||||| || || || || Sbjct 154301 TTGGATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCCACCTCAAGGGTGATCGT 154242 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || || || || || ||||| Sbjct 154241 CTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 154209 >seq379 Length=249056 Score = 84.2 bits (92), Expect = 5e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || || || || || || || ||||| ||||| || || ||||||||| ||||||| ||| Sbjct 108110 GTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGG 108051 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 |||||||| | || | ||||| || || || ||||| ||||| | || | ||| Sbjct 108050 TTGAAGAAGCGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCTCTCGTGAC 107991 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGttt 269286 || ||| | ||| |||||| || || || Sbjct 107990 GAGGGTCTTCACACCGACTTTGCCTGCTT 107962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151390433762320