Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq492 219 5e-52 seq379 87.8 2e-12 >seq492 Length=205486 Score = 219 bits (242), Expect = 5e-52 Identities = 752/1155 (65%), Gaps = 32/1155 (3%) Strand=Plus/Minus Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951 |||| ||| |||| || || || || ||||||| | | | |||| || ||||| Sbjct 125960 GCAAGAGAAGCCAAGTTGCAGACAGCAACCTCATCGGGAGCACAGTATTCAATAATCTCT 125901 Query 62952 GTGCAAAGATTA---CTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA 63008 ||||| || || |||| |||||| || | || | ||| || ||||| ||||| Sbjct 125900 GTGCAGAGGTTGGAGCTACG---GATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTGTTG 125844 Query 63009 CACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCT 63068 || |||||||| || || ||||| || ||||||| ||| |||||| || | || || Sbjct 125843 CAAGCATCCTTGTAGAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCG 125784 Query 63069 TTCCAGACGACTC-GAGCCTTTATTATA----GATTTGTATCTCCTTTCTCTTTCGTATA 63123 | ||||| | || | ||||| | || || | || | |||| | | | | Sbjct 125783 TACCAGA-GCTTCTGGGCCTTGACAGTACGACGACCACGACCTTCCCTCTCATACTTCTC 125725 Query 63124 GTGTATACA-ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCC 63182 || ||| | ||| | ||||| || || | || | | | | || | | || | Sbjct 125724 GT----ACAGAGCGT-CAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTA 125670 Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242 ||||| | ||| | ||| || || ||| || || ||| ||||||||||| || Sbjct 125669 GGACAGAACAAGGTCCAGTCCTGGTTGGCCTCTACACGACGCATGAAGAGATCAGGGGTC 125610 Query 63243 CAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63301 || || || ||| || ||||| | || | ||| || || || ||||| ||| Sbjct 125609 CACAGGGC-ATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCGTGGTTCTTGCGAAG 125551 Query 63302 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63361 || |||||| | | || ||| || |||||||| || | ||| || || | | ||||| Sbjct 125550 GTCAAGGAACTCAAAAACATCCGAGTGCCACGGCTCGAGGTAGATAGCAAACGCACCAGG 125491 Query 63362 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63421 || ||||| ||||| || || | |||||| |||||||| || | ||||| | ||| || Sbjct 125490 GCGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGG 125431 Query 63422 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--A 63479 | || ||||||||| |||||||||| || ||| ||| ||| | | ||| || Sbjct 125430 CACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAGCCAGTAGAACGGATGCG 125371 Query 63480 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 63539 | |||| ||||| || || || || || ||||| | || ||| || | Sbjct 125370 GTGGACATTG--AGACCAATACCACCGGCAGACTTGGAGATCATAGCACATGTCTTGAGA 125313 Query 63540 GTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63599 || |||||||||||||| ||||| || || |||||| | || || || || | Sbjct 125312 GTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGC 125253 Query 63600 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63659 || | ||| ||| || || || || || || ||||| ||||| || || |||| | | Sbjct 125252 TGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGA 125193 Query 63660 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 63719 || | | |||||| |||||||| ||| || || | | ||||| || || || Sbjct 125192 GACATCAAATTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCGACAGCA 125133 Query 63720 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 63779 |||||||| | |||||| || || | ||| | | |||| || ||| | | | |||| Sbjct 125132 ACACGCATGATCATGTGTTGGGGACGTTCGGCAACCTTGCCATTGATTCTGAGGAGGTAG 125073 Query 63780 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 63839 || ||| | ||| || ||||| || || | || ||||| || || |||| ||| Sbjct 125072 GAGCGTTCGAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGTCACGGTCATAAACAATG 125013 Query 63840 ACCGAGTTGAGTTTATCCTTATATTTGTTAACTAT---ATCCATGGTGATACTTGAAATA 63896 ||||||| | || || || || | || | || ||| |||| | ||||| Sbjct 125012 GCCGAGTTCAATTCTTCTGCATGCTTCATGACAGTCTCATACAT-CTGATCC--GAAATC 124956 Query 63897 ATCGGAGAATG-TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTC 63955 || || |||| || || || || || || |||| | | | ||| || ||||| | Sbjct 124955 AT-GGGTAATGCCTTATTGTTCTTGGGGTTGACGTAGTGGTACAGATCTTCAATCACAGC 124897 Query 63956 ACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAAT 64015 | ||| | || || || | ||||||||| || || ||||| || | ||||| || | Sbjct 124896 AGAAAACTGCTTCTTGGTCTGCTTGTGTAGGTTGGAGACGGCGATACGAGCGGCGAGGAC 124837 Query 64016 GGCATAATCCGGATG 64030 || ||||| || || Sbjct 124836 AGCGTAATCGGGGTG 124822 >seq379 Length=249056 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 ||| || || || ||| ||| ||||||||||| | | || || |||||||| || || Sbjct 107961 CAAGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGT 108020 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 | || ||||| | |||||||| || | ||| || || || || || || ||||| || Sbjct 108021 CAAGCCAGGCATCAAACCACGCTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAA 108080 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAG 33452 |||||| || || || ||||| || || | ||| Sbjct 108081 GAAGATACCCTCAACGGCAGCGAATGCGACAAG 108113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622942995106400