Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq470 116 2e-21 seq446 113 3e-20 >seq470 Length=588 Score = 116 bits (128), Expect = 2e-21 Identities = 75/82 (91%), Gaps = 5/82 (6%) Strand=Plus/Minus Query 25915 TGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATG 25969 ||||||||||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct 588 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 529 Query 25970 CGCGTCACTAATTAGATGACGA 25991 |||||||||||||||||||||| Sbjct 528 CGCGTCACTAATTAGATGACGA 507 >seq446 Length=229981 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 || ||||| | | ||| | |||||| ||||| ||| |||||| || || ||||||||| Sbjct 154894 TTGCCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCA 154835 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 || | | || | || || | ||| || || ||||| || | || || || |||| Sbjct 154834 GAAAGAGTGCGACCATCTTCCAGTTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGGT 154775 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 |||| || || || || ||||| ||||||||| | | |||||| ||| Sbjct 154774 GGGATACCCTCCTTATCTTGGATTTTGCTCTTCACATTGTCAATGGTATCTGATGATTCG 154715 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| ||||| ||||| || ||||||||||| || ||||| |||||||| Sbjct 154714 ACTTCCAATGTGATAGTCTTTCCCGTCAAGGTCTTGACGAAAATCTGCAT 154665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334944995628740