Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq446 140 3e-28 seq46 109 5e-19 seq445 89.7 4e-13 >seq446 Length=229981 Score = 140 bits (154), Expect = 3e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || || ||| |||| ||||| ||||| | | Sbjct 154209 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACGATCACCCTTGAGGTGGAGTCTTCT 154268 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || |||| || || ||||||||||||||||| || || || || Sbjct 154269 GATACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCTCCTGACCAG 154328 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||| || |||||| | ||||| ||||||| | ||||| |||||| Sbjct 154329 CAGCGTTTGATCTTTGCTGGAAAACAGCTCGAGGACGGCCGCACCCTATCCGACTACAAC 154388 Query 22399 ATTCAAAAAGAATCCAC 22415 || || ||||||||||| Sbjct 154389 ATCCAGAAAGAATCCAC 154405 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || ||| | || || || ||| |||| | ||||| ||| | | Sbjct 154437 ATGCAAATTTTCGTCAAGACTCTCACTGGAAAGACGATCACGTTGGAAGTCGAATCATCA 154496 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| |||||||||||||| || || ||||| ||||| || Sbjct 154497 GACACCATTGATAACGTCAAGTCGAAAATTCAAGACAAAGAAGGCATTCCTCCCGACCAG 154556 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || || || || | || ||| |||||| | ||||| |||||| Sbjct 154557 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTTCCGACTACAAC 154616 Query 22399 ATTCAAAAAGAATCCACCATACA 22421 |||||||| |||||||| |||| Sbjct 154617 ATTCAAAAGGAATCCACTCTACA 154639 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || || || || || || |||| | ||||| ||| | | Sbjct 154665 ATGCAGATTTTCGTCAAGACCTTGACGGGAAAGACTATCACATTGGAAGTCGAATCATCA 154724 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || ||||| ||||| ||||||||||| |||||||| || Sbjct 154725 GATACCATTGACAATGTGAAGAGCAAAATCCAAGATAAGGAGGGTATCCCACCCGACCAG 154784 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||| || || || | || ||| ||||| | || ||||||||| Sbjct 154785 CAGCGATTGATCTTTGCTGGTAAGCAACTGGAAGATGGTCGCACTCTTTCTGATTACAAC 154844 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||||| | || || || | || | ||||| || Sbjct 154845 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGTCTCCGCGGTGG 154891 Score = 100 bits (110), Expect = 2e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || ||||| || |||| ||||| ||||| | | Sbjct 153926 ATGCAGATCTTTGTCAAGACCCTTACTGGTAAGACCATCACCCTTGAGGTGGAGTCTTCT 153985 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || ||||| ||||||||||| ||||| || || || Sbjct 153986 GATACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 154045 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || || || |||||| | || || |||||| | || || |||||| Sbjct 154046 CAGCGTTTGATCTTCGCTGGAAAACAGCTCGAAGACGGTCGCACCCTTTCTGACTACAAC 154105 Query 22399 ATTCA 22403 ||||| Sbjct 154106 ATTCA 154110 >seq46 Length=531280 Score = 109 bits (120), Expect = 5e-19 Identities = 132/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || |||| || || || || || |||| ||| | Sbjct 30207 TTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCAT 30266 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || || || |||||||||||||| || ||||| || || ||||| Sbjct 30267 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 30326 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || |||||||| || ||| | || ||| |||||| ||||||| |||||||| || || Sbjct 30327 GATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAACATCCAGAA 30386 >seq445 Length=1169376 Score = 89.7 bits (98), Expect = 4e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 22307 TTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGT 22366 ||| ||||||||||||||| || ||||| || || ||| | || || ||||| || ||| Sbjct 378664 TTCCAGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGC 378605 Query 22367 TAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 | || || ||||||| ||||||| |||||||| || || || ||||| Sbjct 378604 TCGAAGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCAC 378556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725237665100