Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq446 140 8e-28 seq46 107 5e-18 >seq446 Length=229981 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| ||| |||||| ||||| || ||||||| Sbjct 154435 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAT 154376 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | |||||||| || ||||||| |||||| || | ||| Sbjct 154375 AGGGTGCGGCCGTCCTCGAGCTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGG 154316 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || ||||| || | || || || || || | ||| || || || Sbjct 154315 ATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCCACC 154256 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| || || |||||||||||||| || ||||| Sbjct 154255 TCAAGGGTGATCGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 154209 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| ||| ||||| || || ||||||| Sbjct 154663 CCACCACGGAGACGGAGGACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAA 154604 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| || || ||||| |||| ||||| || || Sbjct 154603 AGAGTGCGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGA 154544 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || || ||||||| || ||||| || || | || ||||| ||| Sbjct 154543 ATGCCTTCTTTGTCTTGAATTTTCGACTTGACGTTATCAATGGTGTCTGATGATTCGACT 154484 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | |||||||||||| || || |||||||||||||| || ||||| Sbjct 154483 TCCAACGTGATCGTCTTTCCAGTGAGAGTCTTGACGAAAATTTGCAT 154437 Score = 120 bits (132), Expect = 7e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | |||| ||| || || ||||| || || || | Sbjct 154891 CCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAA 154832 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| || || || ||||||| ||||| || |||| Sbjct 154831 AGAGTGCGACCATCTTCCAGTTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGGTGGG 154772 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || ||||| |||||||| ||| ||||| || || || | ||| ||||| || Sbjct 154771 ATACCCTCCTTATCTTGGATTTT-GCTCTTCACATTGTCAATGGTATCTGATGATTCGAC 154713 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| | ||||| ||||| || |||| ||||||||||| |||||||| Sbjct 154712 TTCCAATGTGATAGTCTTTCCCGTCAAGGTCTTGACGAAAATCTGCAT 154665 >seq46 Length=531280 Score = 107 bits (118), Expect = 5e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| ||||| || ||||| | || ||||| || |||||| Sbjct 30386 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 30327 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||| || ||||| || || || |||||||| || | || || || || Sbjct 30326 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 30267 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | ||| || || || ||||| ||||| ||||| || || || ||||||||||| Sbjct 30266 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 30208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179646238266120