Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq446 122 8e-23 seq492 111 1e-19 >seq446 Length=229981 Score = 122 bits (134), Expect = 8e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || || || || ||||||||||| || || || ||| Sbjct 154666 ATACCACCACGGAGACGGAGGACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCG 154607 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || ||| || | ||| || || ||| | |||||||| |||||||| || Sbjct 154606 GAAAGAGTGCGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGA 154547 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||||||||| ||||||||||| |||| || | || | |||||| || || || Sbjct 154546 GGAATGCCTTCTTTGTCTTGAATTTTCGACTTGA-CGTTATCAATGGTGTCTGATGATTC 154488 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| | || | ||| || || || ||||| || || ||||||||||| Sbjct 154487 GACTTCCAACGTGATCGTCTTTCCAGTGAGAGTCTTGACGAAAATTTGCAT 154437 >seq492 Length=205486 Score = 111 bits (122), Expect = 1e-19 Identities = 425/656 (65%), Gaps = 15/656 (2%) Strand=Plus/Plus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 ||||| ||||||||| ||||| ||| ||||||| || ||| | || | ||||| || Sbjct 125095 AAGGTTGCCGAACGTCCCCAACACATGATCATGCGTGTTGCTGTCGGTATTCACGG-CGA 125153 Query 122958 GA-CATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGC 123016 || |||||| || || | || || ||| ||||||||||||| |||| ||||| ||||| Sbjct 125154 GAACATCGAGAAAGCCATTGAGACATACAATTTGATGTCTCAGAAATACTTCACACACGC 125213 Query 123017 GAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCT 123076 | ||||||||||||| ||| || || || ||| | |||| || || | | Sbjct 125214 GTCTCCCACTTTGTTCAACGCAGGTACTCCTCGACCACAGCTTGCTTCTTGCTTCCTTGT 125273 Query 123077 CACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGA-TTGCGCGTTGA 123135 | || ||||||||||| ||||||||||| ||| | | || || || ||| Sbjct 125274 GGACATGAAGGAAGACAGCATTGAGGGTATCTATGATACTCT-CAAGACATGTGCTATGA 125332 Query 123136 TTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCC 123195 | ||||| | || ||| || || || | || || ||| | | | || | Sbjct 125333 TCTCCAAGTCTGCCGGTGGTATTGGTCTCAATGTCCACCGCATCCGTTCTACTGGCTCCT 125392 Query 123196 GCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATA 123255 |||| || | ||| | || | | ||| || | | ||||| |||| | ||| | Sbjct 125393 ACATCGGAGGAACCAATGGTACTTCAAACGGTCTTGTGCCTATGCTCAGAGTGTTCAACA 125452 Query 123256 ACGCCGTGCGGCACGTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGGCGATCTATC 123312 || ||| | |||||||||| || || ||| ||| || ||| | || ||||| | Sbjct 125453 ACACCGCCAGATACGTCGACCAAGGAGGTAACAAGCGCCCTGGTGCGTTTGCTATCTACC 125512 Query 123313 TAGAACCGTGGCACGTTGATGTGTACGA-TTTTTTAAATTTAAAACGCAACATGGGGGCG 123371 | || ||||||||| ||||| | || || || | || | | ||| || Sbjct 125513 TCGAGCCGTGGCACTCGGATGTTTTTGAGTTCCTTGACCTTCGCAAG-AACCACGGCAAA 125571 Query 123372 GAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGA 123431 |||||| ||||| ||| |||| || || | ||| || ||| | || ||||| Sbjct 125572 GAAGAAGTCCGTGCCCGTGATCTGTTCTATGCCCTGTGGACCCCTGATCTCTTCATGCGT 125631 Query 123432 CGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCC---CGATCGGTGTCCCGGCTTG 123488 || ||| | | | || | ||| | | | ||||| ||| || ||| | |||| Sbjct 125632 CGTGTAGAGGCCAACCAGGACTGGACCTTGTTCTGTCCTAACGA--GGCTTCCGGTCTTG 125689 Query 123489 AGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGG 123544 |||||| |||||| | ||||||||| |||||| | | || ||| | ||||| Sbjct 125690 -CCGACGTCTACGGCGAAGAGTTTGACGCTCTGTACGAGAAGTATGAGAGGGAAGG 125744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000148978400