Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq379 147 2e-30 seq46 114 1e-20 seq446 100 3e-16 seq445 95.1 1e-14 >seq379 Length=249056 Score = 147 bits (162), Expect = 2e-30 Identities = 325/481 (68%), Gaps = 10/481 (2%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || ||||| | | || ||| | ||| ||||| ||||||||| Sbjct 107695 TTCTCGAAGAAGTTGGTCTTTCCGGCAAGAGAGATGTTCTCCATGAAATCAAAGGGGTTG 107754 Query 132685 GCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCG 132744 | | ||||||| ||| || | || | || | || | ||| || |||||||| Sbjct 107755 GTGGCATTGTAGTACTTCTTGTTGCCAAGAGCAACCAAGAGACGGTCAGCAACGAACTCA 107814 Query 132745 ATGTATTGCGACATGGT-TTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTTCGG 132802 ||||| || |||| |||| | || | ||| |||| | |||| || || || |||| Sbjct 107815 ATGTACTGGCACATCAACTTCG-AGTTCATTCCGAGCAAAGCGCAG-GGAAGAGCGTCGG 107872 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT---TTCCCTAACGCGCGCCG 132859 | | || ||| || ||||| || ||||| | ||| ||| |||| | | Sbjct 107873 TCAAGAACTCTTGTTCAATGGCAACGGCGTCAACAATGATGTCTTCAATAAC---CTTGG 107929 Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 ||| || || | | || ||| | |||||| ||||||||| || | |||| Sbjct 107930 GGCTAGGACGGTTGTTGAGGTGGGAGAAGAGCAAGCAGGCAAAGTCGGTGTGAAGACCCT 107989 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979 |||| | || || || |||||| ||| |||||||| ||||| | || || || || | Sbjct 107990 CGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCAGGCATCAAACCACGCTTCTTCA 108049 Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 ||| || || | ||| ||| ||| || ||||||| ||||| ||||| ||||| || | Sbjct 108050 ACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATACCCTCAACGGCAGCGAATGCGA 108109 Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 | ||||||| | || |||| || ||| | |||||||||||| ||||| ||||||| Sbjct 108110 CAAGGCGCTGAGCAAAGGTGGACTCCTTGTCCGAGATCCAGCGCAGAGCCCAGTCGGCCT 108169 Query 133100 T 133100 | Sbjct 108170 T 108170 >seq46 Length=531280 Score = 114 bits (126), Expect = 1e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || |||||||| || ||||||||| |||| |||||| || |||||| | | Sbjct 30208 TTCGTCAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATC 30267 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| ||||||| ||||| || Sbjct 30268 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 30327 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || || || ||||| || || | ||||| ||| ||||||||||||||| ||| Sbjct 30328 ATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAACATCCAGAAG 30387 Query 38433 G 38433 | Sbjct 30388 G 30388 >seq446 Length=229981 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || || ||||| | || ||||| | | Sbjct 154437 ATGCAAATTTTCGTCAAGACTCTCACTGGAAAGACGATCACGTTGGAAGTCGAATCATCA 154496 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || ||||| | |||||||| || ||||| ||||||| Sbjct 154497 GACACCATTGATAACG-TCAAGTCGAAAATTCAAGACAAAGAAGGCATTCCTCCCGACCA 154555 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | |||| ||| || || || || || || | ||||| || ||||||||| Sbjct 154556 GCAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTTCCGACTACAA 154615 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| ||||||||| | || || || | || || ||| Sbjct 154616 CATTCAAAAGGAATCCACTCTACACCTTGTCCTCCGT 154652 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || || |||||| | || || ||| | | Sbjct 154209 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACGATCACCCTTGAGGTGGAGTCTTCT 154268 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || || |||| ||||| ||||| || || | ||||| Sbjct 154269 GATACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCTCCTGACCAG 154328 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | || || |||||||| || |||| |||||||| |||||||||| Sbjct 154329 CAGCGTTTGATCTTTGCTGGAAAACAGCTCGAGGACGGCCGCACCCTATCCGACTACAAC 154388 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || ||| | || || || | || || ||| Sbjct 154389 ATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGT 154424 >seq445 Length=1169376 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| ||||||| ||||| | || | ||| || || ||||| || Sbjct 378659 GACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAA 378600 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||||||| ||||||||||||||| ||||| | || || || ||||| || Sbjct 378599 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTC 378540 Query 38457 CG 38458 || Sbjct 378539 CG 378538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500169423833600