Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq446 201 3e-46 seq445 93.3 9e-14 >seq446 Length=229981 Score = 201 bits (222), Expect = 3e-46 Identities = 170/209 (81%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| |||||||| || |||||||| ||||| |||| |||||| | |||||||| Sbjct 154645 ACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCA 154586 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || |||||||| ||||| || | ||| || ||||| |||||||||||||||||||||||| Sbjct 154585 AGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCTTGA 154526 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||||||||| ||||||||||| || ||| ||||| | || | ||||||| Sbjct 154525 ATTTTCGACTTGACGTTATCAATGGTGTCTGATGATTCGACTTCCAACGTGATCGTCTTT 154466 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | |||||| Sbjct 154465 CCAGTGAGAGTCTTGACGAAAATTTGCAT 154437 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||||||||| ||||| || || ||||| |||| || || | || || ||| Sbjct 154417 ACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCGTCCTCG 154358 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || || ||||| | || || ||||| ||||| || || || |||||||| Sbjct 154357 AGCTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCTTGG 154298 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || ||||| || ||| ||||| |||||||| | ||||||| Sbjct 154297 ATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCCACCTCAAGGGTGATCGTCTTT 154238 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | |||||| Sbjct 154237 CCAGTGAGAGTCTTGACGAAGATTTGCAT 154209 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015 ||||| ||||| || | ||| || | || ||||||||||| || || |||||||| | Sbjct 154110 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGTTTTCCAGCGAAGATCAAA 154051 Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075 || || ||||| ||||||||||| || ||||| ||||| || ||||||||| || ||| Sbjct 154050 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 153991 Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135 || || ||| ||||| |||||||| | ||||| || || | || || || || | Sbjct 153990 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTACCAGTAAGGGTCTTGACAAAGATC 153931 Query 195136 TGCAT 195140 ||||| Sbjct 153930 TGCAT 153926 >seq445 Length=1169376 Score = 93.3 bits (102), Expect = 9e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||||||| || || || ||||| |||| || || | || ||||||||||| Sbjct 378549 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGCTG 378608 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||| || |||||||| | || || ||||| || || || || || |||||| ||| Sbjct 378609 CTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCTGGAA 378664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109473923774180