Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq492 105 8e-18 >seq492 Length=205486 Score = 105 bits (116), Expect = 8e-18 Identities = 346/536 (65%), Gaps = 4/536 (1%) Strand=Plus/Minus Query 48263 TTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGG 48322 |||||| ||||| ||| | ||| ||||| || || | | ||| | ||||| || Sbjct 125577 TTCTTCTTTGCCGTGGTTCTTGCGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCACGG 125518 Query 48323 TTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGC 48382 || | || || || | |||| || || || ||||||||||| || | |||||||| Sbjct 125517 CTCGAGGTAGATAGCAAACGCACCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGC 125458 Query 48383 AGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGA 48442 || ||||| | ||||| | ||| || |||| ||| ||||| ||||||||||||| Sbjct 125457 GGTGTTGTTGAACACTCTGAGCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCC 125398 Query 48443 AATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAAATACCTATACCACCTGCCATT 48500 || || ||| ||| | || | |||| | ||| |||||||| || Sbjct 125397 GATGTAGGAGCCAGTAGAACGGATGCGGTGGACATTG--AGACCAATACCACCGGCAGAC 125340 Query 48501 TTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATC 48560 || || || | |||||| || || |||||||| || || || || || || || || Sbjct 125339 TTGGAGATCATAGCACATGTCTTGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTC 125280 Query 48561 ATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTT 48620 || | | || || ||| || | || || || ||| |||| || || || || Sbjct 125279 ATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTG 125220 Query 48621 GGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCT 48680 ||||| || || | || |||||| || | ||| || ||||| ||||| | || Sbjct 125219 GGAGACGCGTGTGTGAAGTATTTCTGAGACATCAAATTGTATGTCTCAATGGCTTTCTCG 125160 Query 48681 ATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACA 48740 || | | || ||||| | || |||||||| | ||| | ||| || | ||| || Sbjct 125159 ATGTTCTCGCCGTGAATACCGACAGCAACACGCATGATCATGTGTTGGGGACGTTCGGCA 125100 Query 48741 ATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796 | ||| ||| ||| | | || || || ||| | || || ||||| || || Sbjct 125099 ACCTTGCCATTGATTCTGAGGAGGTAGGAGCGTTCGAGAGTCTTGAAACCGAAGTA 125044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562105005765600