Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq446 113 4e-19 seq279 87.8 1e-11 >seq446 Length=229981 Score = 113 bits (124), Expect = 4e-19 Identities = 159/221 (72%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||||||| ||||| || || || ||| || ||| ||||| || | ||||| | Sbjct 154655 GAGACGGAGGACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCG 154596 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||||||||| || || || ||||| | || ||||| || |||||||| ||||| Sbjct 154595 GCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGAATGCCTTC 154536 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 ||| ||||||||||| || || ||||| || || | ||| | | ||| | | Sbjct 154535 TTTGTCTTGAATTTTCGACTTGACGTTATCAATGGTGTCTG-ATGATTCGACTTCCAACG 154477 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | || || ||||| ||||| || ||||||||||||||| Sbjct 154476 TGATCGTCTTTCCAGTGAGAGTCTTGACGAAAATTTGCATA 154436 >seq279 Length=292039 Score = 87.8 bits (96), Expect = 1e-11 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || || || || || || || || ||||| || ||||| || || || |||||| Sbjct 110995 GCTGTCATCACCGTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAGGATGCT 111054 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || | |||||| || | || || || ||||| ||||| || ||||||||||| || || Sbjct 111055 GGTCTTATTGCCGGTTTGAACGTCCTCCGTATCATCAACGAGCCTACTGCTGCCGCCATT 111114 Query 550520 GCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGA 550579 || || || || || || | ||| || | || || |||||||| ||| ||| Sbjct 111115 GCCTACGGTCTCGACAAGAAGGCTGAGGGTGAGCGCAACGTCCTCATCTTCGATCTTGGT 111174 Query 550580 GGT 550582 ||| Sbjct 111175 GGT 111177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029267442364600