Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq446 114 8e-20 >seq446 Length=229981 Score = 114 bits (126), Expect = 8e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| || || || ||| || || || || || | ||||| Sbjct 154658 ACGGAGACGGAGGACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGT 154599 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||||||||||||| ||||| ||||| | || || || || |||||||| || Sbjct 154598 GCGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGAATGCC 154539 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||| ||||||||||| || ||||| ||||| || || | || | | || ||| Sbjct 154538 TTCTTTGTCTTGAATTTTCGACTTGACGTTATCAATGGTGTCTGATGATTCGACTTCCAA 154479 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||||||||| ||||||||||| Sbjct 154478 -CGTGATCGTCTTTCCAGTGAGAGTCTTGACGAAAATTTG 154440 Score = 105 bits (116), Expect = 4e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || ||||| ||||| || |||||| | || || || | ||| || Sbjct 154430 ACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGATAGGGT 154371 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | || || || || ||||||||||| || | ||| || || |||||||| || || Sbjct 154370 GCGGCCGTCCTCGAGCTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGGATACC 154311 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||||| ||||| |||||| || || ||||||| | | | |||| Sbjct 154310 CTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCCA-CCTCAA 154252 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || || || || ||||||||||| ||||| ||||| Sbjct 154251 GGGTGATCGTCTTTCCAGTGAGAGTCTTGACGAAGATTTG 154212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268156036779920