Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq68 131 2e-24 seq492 89.7 6e-12 seq379 89.7 6e-12 >seq68 Length=502029 Score = 131 bits (144), Expect = 2e-24 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||||||||||||||| | || ||||| | || |||||| | || || ||| Sbjct 121638 GCGGCCAACTACCTCGACATCAAGGCCCTTCTCGACGTCGGCTGCAAGACCGTCGCAAAC 121579 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| ||||||||||||||||||||||| ||||| || ||| Sbjct 121578 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACCTTCAACATTCAGAACG 121524 >seq492 Length=205486 Score = 89.7 bits (98), Expect = 6e-12 Identities = 274/427 (64%), Gaps = 8/427 (2%) Strand=Plus/Minus Query 1628170 ATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCAG 1628228 ||||| ||||| ||||||| | ||| | ||||| ||||||| |||||| | || Sbjct 125906 ATCTCTGTGCAGAGGTTGGAGCTACGGA-TAGTACCGAGGTTCTTTTGGTTGCTCTTCTT 125848 Query 1628229 GTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGAT 1628288 |||| || ||||||| ||||||| | || || ||||| |||| ||| ||| ||| Sbjct 125847 GTTGCAAGCATCCTTGTAGAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCGAGGAT 125788 Query 1628289 GGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCG-CG--CGCGGCCCTNNNNNNNNNN 1628345 ||| |||||| || | || | |||||| || || | || || | Sbjct 125787 GGCGTACCAGAGCTTCTGGGC---CTTGACAGTACGACGACCACGACCTTCCCTCTCATA 125731 Query 1628346 NNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGGA 1628405 ||||| | |||||||| ||| || |||| |||||| Sbjct 125730 CTTCTCGTACAGAGCGTCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTT 125671 Query 1628406 CGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACACGT 1628465 ||||| || | | |||||| || | | | || ||||| ||||| ||| || Sbjct 125670 AGGACAGAACAAGGTCCAGTCCTGGTTGGCCTCTACACGACGCATGAAGAGATCAGGGGT 125611 Query 1628466 CCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAG 1628525 |||||| || || || || || || || ||| || || |||||||||||||| || Sbjct 125610 CCACAGGGCATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCGTGGTTCTTGCGAAG 125551 Query 1628526 GTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTT 1628585 ||| || | || | || || | |||||||||||| |||||| ||||| || || Sbjct 125550 GTCAAGGAACTCAAAAACATCCGAGTGCCACGGCTCGAGGTAGATAGCAAACGCACCAGG 125491 Query 1628586 GCGCTTG 1628592 ||||||| Sbjct 125490 GCGCTTG 125484 >seq379 Length=249056 Score = 89.7 bits (98), Expect = 6e-12 Identities = 138/195 (71%), Gaps = 9/195 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| |||| | ||| ||||| | || ||||| Sbjct 107985 ACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCAGGCATCAAACCACGCTT 108044 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| | ||| ||||| | | ||| ||| ||||| ||||| ||||| ||||| || || Sbjct 108045 CTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATACCCTCAACGGCAGCGAA 108104 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACTTCATCGC 869355 ||| || |||| ||||||||| || |||||||| |||||| || || Sbjct 108105 TGCGACAAGGCGCTGAGCAAAGGTG--GA----CTCCTTGTCCGAGATCCAGCGCAGAGC 108158 Query 869356 CCAGTCGGCCTTTTT 869370 |||||||||||| || Sbjct 108159 CCAGTCGGCCTTCTT 108173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107094885071180